Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq55 95.1 5e-14 >seq55 Length=198364 Score = 95.1 bits (104), Expect = 5e-14 Identities = 212/316 (67%), Gaps = 2/316 (1%) Strand=Plus/Plus Query 12731 AGAACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAA 12790 || |||||||| ||| || |||||||| | ||| || |||||||| | ||| | Sbjct 22896 AGCACATCGTAGTAGATGACGTTCATGCCCATGGCCTCAGCCAGGACAGACAGCTGGGCG 22955 Query 12791 CCAATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGA 12850 || |||| ||||| || | || || || ||||| || | || || | ||| | | || Sbjct 22956 CCGATGTGGCCATAGCCGATAATTCCCAGTGTCTTGCCACGAATCTCCCAGCA-CTTGGA 23014 Query 12851 GAAGTC-TTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGA 12909 | | | |||||||| | || |||| || || || | || || | ||| || | Sbjct 23015 GCTGACCTTGTTCCAGGTTCCGCGGTGCAGCTCCATGGAGCGGTCGCCCAACTGGCGGGC 23074 Query 12910 AAGATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGA 12969 || |||| | | || || || ||||| || || || | || |||| |||||||| Sbjct 23075 CAGGATAATGATCTCACCGATCATAAGCTCGGCTACACTGCGAGAGTTGGCGAAGGGAGA 23134 Query 12970 ATTAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAAT 13029 || ||||| |||||||| | |||| || || |||| ||||| | | ||| || Sbjct 23135 GTTGAAGACGGCAATGCCATGCTTGGCGGCGTACTCCAGATCCACCTGGTTGGTACCGAT 23194 Query 13030 GCAGAAGCATCCTATG 13045 ||||||||| || ||| Sbjct 23195 GCAGAAGCAGCCAATG 23210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884874928699175