Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq55 95.1 5e-14
>seq55
Length=198364
Score = 95.1 bits (104), Expect = 5e-14
Identities = 212/316 (67%), Gaps = 2/316 (1%)
Strand=Plus/Plus
Query 12731 AGAACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAA 12790
|| |||||||| ||| || |||||||| | ||| || |||||||| | ||| |
Sbjct 22896 AGCACATCGTAGTAGATGACGTTCATGCCCATGGCCTCAGCCAGGACAGACAGCTGGGCG 22955
Query 12791 CCAATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGA 12850
|| |||| ||||| || | || || || ||||| || | || || | ||| | | ||
Sbjct 22956 CCGATGTGGCCATAGCCGATAATTCCCAGTGTCTTGCCACGAATCTCCCAGCA-CTTGGA 23014
Query 12851 GAAGTC-TTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGA 12909
| | | |||||||| | || |||| || || || | || || | ||| || |
Sbjct 23015 GCTGACCTTGTTCCAGGTTCCGCGGTGCAGCTCCATGGAGCGGTCGCCCAACTGGCGGGC 23074
Query 12910 AAGATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGA 12969
|| |||| | | || || || ||||| || || || | || |||| ||||||||
Sbjct 23075 CAGGATAATGATCTCACCGATCATAAGCTCGGCTACACTGCGAGAGTTGGCGAAGGGAGA 23134
Query 12970 ATTAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAAT 13029
|| ||||| |||||||| | |||| || || |||| ||||| | | ||| ||
Sbjct 23135 GTTGAAGACGGCAATGCCATGCTTGGCGGCGTACTCCAGATCCACCTGGTTGGTACCGAT 23194
Query 13030 GCAGAAGCATCCTATG 13045
||||||||| || |||
Sbjct 23195 GCAGAAGCAGCCAATG 23210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884874928699175
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |