Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09]
657 sequences; 36,917,822 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq399 966 0.0
seq130 596 6e-168
seq135 583 4e-164
>seq399
Length=3058
Score = 966 bits (1070), Expect = 0.0
Identities = 615/663 (93%), Gaps = 5/663 (1%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
|||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 1564 TGTGAAACTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATTGGTGGTAAAT 1623
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1624 TCCATCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 1683
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1684 TGAAAAGCACTTTGAAAAGAGAGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 1743
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT 262
|| |||||||||||||| |||||||| || ||| | ||| |||||||||||| |||||
Sbjct 1744 GCGGCCAGACTTGCCCGCGGTTGCTCAGCCCGCCTTTTGGCGGGTGCACTCTTCCGCGGT 1803
Query 263 CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCC-CCCTTCGGG 321
|||||||||||| | |||||||||||||||||||| |||||| |||||| ||| |||||
Sbjct 1804 CAGGCCAGCATCGGTTCGGGCGGTCGGATAAAGGCGACGGGAACGTGGCCTCCCCTCGGG 1863
Query 322 G-GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTA 380
| ||||||||||||||| | | ||||||||| ||| |||| ||||| |||||| | ||||
Sbjct 1864 GAGGTGTTATAGCCCGGCGCGCAATGCGGCCAGCCCGGACCGAGGTTCGCGCT-CTGCTA 1922
Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440
||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 1923 GGATGCTGGCGTAATGGCCGTAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAACA 1982
Query 441 TCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAA 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1983 TCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAA 2042
Query 501 CCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560
|| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2043 CC--GCAAGGTGCACCATCGACCGATCCTGATGTCTTCGGAAGGATTTGAGTAAGAGCAT 2100
Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACT 620
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2101 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCGTGAATAGGGTGAAGCCAGAGGAAACT 2160
Query 621 CTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct 2161 CTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGCGTATAGGGG 2220
Query 681 CGA 683
|||
Sbjct 2221 CGA 2223
>seq130
Length=645
Score = 596 bits (660), Expect = 6e-168
Identities = 452/523 (86%), Gaps = 12/523 (2%)
Strand=Plus/Minus
Query 163 GAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAG 222
||||||||||||||||||||||||| ||||||||| | |||||||||||||||| ||| |
Sbjct 645 GAGTTAAAAAGCACGTGAAATTGTTAAAAGGGAAGGGATTGCAACCAGACTTGCTCGCGG 586
Query 223 TTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT-CAGGCCAGCATCAGCTCGG 281
| | || |||| | | ||||| |||| | ||| | |||||||||||| || |
Sbjct 585 T-GTTCCGCCGGTCTTCTGACCGGTCTACTCGCC-GCGTTGCAGGCCAGCATCGTCTGGT 528
Query 282 GCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTG 341
|| | |||||| | | ||||||| || |||| ||| | ||||||||| |||
Sbjct 527 GCCGCTGGATAA-GACTTGAGGAATGTAGCTCCCTC--GGGAGKGTTATAGCCTCTTGTG 471
Query 342 GAATGCGGCCCGC-CTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTG 400
|||| || || | || | |||||||||||| |||||||||||||||||||||||| |
Sbjct 470 --ATGCAGCGAGCGCCGGGC-GAGGTCCGCGCTTCGGCTAGGATGCTGGCGTAATGGTCG 414
Query 401 TAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG 460
||| | |||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 413 TAATCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTCGGGTG 354
Query 461 TCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCG 520
|||||||| | ||||||||||||||||||||||||| ||||| | |||||| |||||
Sbjct 353 TCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGAGAACCGC--AAGGTGCATCATCG 296
Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 295 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 236
Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 235 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 176
Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||| |||||||||||||||||||||||||||||||||||||
Sbjct 175 TTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 133
>seq135
Length=637
Score = 583 bits (646), Expect = 4e-164
Identities = 447/516 (87%), Gaps = 14/516 (3%)
Strand=Plus/Plus
Query 171 AAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAA 230
||||||||||||||||| ||||||||| | |||||||||||||||| ||| || | ||
Sbjct 1 AAGCACGTGAAATTGTTAAAAGGGAAGGGATTGCAACCAGACTTGCTCGCGGT-GTTCCG 59
Query 231 CCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT-CAGGCCAGCATCAGCTCGGGCGGTCGG 289
|||| | | ||||| |||| | ||| | |||||||||||| || | || | ||
Sbjct 60 CCGGTCTTCTGACCGGTCTACTCGCC-GCGTTGCAGGCCAGCATCGTCTGGTGCCGCTGG 118
Query 290 ATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGG 349
|||| | | ||||||| || |||| ||| ||||||||||| ||| |||| |
Sbjct 119 ATAA-GACTTGAGGAATGTAGCTCCCTC--GGGAGTGTTATAGCCTCTTGTG--ATGCAG 173
Query 350 CCCGC-CTGGACTGAGGTCCGC-GCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGG 407
| || | || | ||||||||| |||| | |||||||||||||||||||| ||||||||
Sbjct 174 CGAGCGCCGGGC-GAGGTCCGCCGCTCTG-CTAGGATGCTGGCGTAATGGCCGTAAGCGG 231
Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 232 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTCGGGTGTCAAACC 291
Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATC 527
||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 292 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCGC--AAGGTGCACCATCGACCGATC 349
Query 528 CTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA 587
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 350 CTGATGTCTTCGGAAGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA 409
Query 588 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGC 647
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 410 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGAC 469
Query 648 GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||||||||||||||| ||||||||||||
Sbjct 470 GTGCAAATCGATCGTCAAATTTGCGTATAGGGGCGA 505
Score = 196 bits (216), Expect = 2e-47
Identities = 119/125 (95%), Gaps = 2/125 (2%)
Strand=Plus/Plus
Query 457 GGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACC 516
|||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 515 GGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCGC--AAGGTGCACC 572
Query 517 ATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGA 576
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 573 ATCGACCGATCCTGATGTCTTCGGAAGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGA 632
Query 577 AAGAT 581
|||||
Sbjct 633 AAGAT 637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079985907350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |