Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09]
657 sequences; 36,917,822 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq376 356 4e-96
seq399 351 2e-94
>seq376
Length=3926
Score = 356 bits (394), Expect = 4e-96
Identities = 236/258 (91%), Gaps = 3/258 (1%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 282
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 283 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 341
Query 122 ACCAACCATAGTCGA-TGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
||| ||| || ||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct 342 ACCCGCCAGAG-CGAGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 400
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||| | | | ||||||||
Sbjct 401 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAACTACAAAATCAAGA 460
Query 241 AAGAGCTATCAATCTGTC 258
||||||| ||||||||||
Sbjct 461 AAGAGCTCTCAATCTGTC 478
>seq399
Length=3058
Score = 351 bits (388), Expect = 2e-94
Identities = 235/258 (91%), Gaps = 3/258 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 546 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGA 487
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 486 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 428
Query 122 ACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
||| ||| || ||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct 427 ACCCGCCAGAG-CGAGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 369
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||| | | | ||||||||
Sbjct 368 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAACTACAAAATCAAGA 309
Query 241 AAGAGCTATCAATCTGTC 258
||||||| ||||||||||
Sbjct 308 AAGAGCTCTCAATCTGTC 291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796794928617
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |