Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09]
657 sequences; 36,917,822 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq425 338 1e-90
seq25 293 4e-77
>seq425
Length=2277
Score = 338 bits (374), Expect = 1e-90
Identities = 244/278 (88%), Gaps = 3/278 (1%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 580 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 523
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 522 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCG 463
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||||||||||| | ||| |||| | | ||| ||||||||||||||||||||| ||
Sbjct 462 GAACGGGGTGATTTCCCCCTACACACCACACTCGTGTACGAATAGGCTTCGGCCCCGGAC 403
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCA 240
|| || |||||| | ||| | ||| | ||| || ||| | ||||| ||||| ||||||
Sbjct 402 CTCAGAAGGCCGACGACGCGGTGCCCCCCGAAACG-GGGCCCCTCAGTTGGCGCATTGCA 344
Query 241 ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||||||| |||| ||||||||||||||||||||||||
Sbjct 343 ATTTCACCGTGCGTAGGGATAAATCCTTTGCAGACGAC 306
>seq25
Length=859
Score = 293 bits (324), Expect = 4e-77
Identities = 235/278 (85%), Gaps = 4/278 (1%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 244 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 301
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||
Sbjct 302 GCCGCGAAGCTACCATCTGCTGGATAATAGCTGAACGCCTCTAAGTTAGAATCCATGCCA 361
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||||| |||| ||||| |||| ||||| |||||||||||||||||||||||| ||
Sbjct 362 GAACGGGACGATTTTCTCCAGCACGTCGTACGAGGATACGAATAGGCTTCGGCCCCGGAC 421
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCA 240
||||||||||| ||| || || |||| || | | | | |||||||| |||
Sbjct 422 CTTAGCAGGCC-ATAACTCCTCTCTCGTAGAAGTCGGGAGAGGT-AATTGGCGGATAGCA 479
Query 241 ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||| || |||| ||||| |||||||||||||||||
Sbjct 480 ATTTGACAGCGCGCTGGGATGAATCCTTTGCAGACGAC 517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819194786048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |