Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq115 219 3e-52 seq482 143 2e-29 >seq115 Length=330173 Score = 219 bits (242), Expect = 3e-52 Identities = 445/657 (68%), Gaps = 8/657 (1%) Strand=Plus/Minus Query 66287 GGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAAT 66346 || || | ||| || |||||||||| ||| || || | |||||| || || ||| ||| Sbjct 101812 GGGCATTCGTGAGGGCACATCAGCGTCCACTCGCCGTTCTGTTCGACTCGCTTCATGAAT 101753 Query 66347 AGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGA 66406 || || || ||||| | ||| ||||| |||||||| || ||| ||| || ||||||| Sbjct 101752 AGGTCGGGAATCCACAAGGCATAGAAAAGATCGCGAGCACGTGCCTCTTCTTTGCCGTGG 101693 Query 66407 TTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCG 66466 || || | || || | | | | || || || |||||||| || ||||| ||||| Sbjct 101692 TTCTTTCTCAGATCCAACCAGTTGATGACATCTGCGTGCCATGGCTCGAGGTAAATGGCA 101633 Query 66467 AACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACA 66526 || | || ||| ||| |||||||| |||||||||||||| || ||||||| Sbjct 101632 AATGCACCAGGACGCTTGTTTCCACCTTGATCGACGTAGCGAGCAGTCGCGTCGAAGACA 101573 Query 66527 CGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT 66586 || | ||| || || |||||||| ||| |||| || || || | ||| ||||| Sbjct 101572 CGGAGCATGGGAACAAGCCCGTTTGATGTGCCGTTTGTTCCTCCAATGTATGATCCGGTG 101513 Query 66587 GCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA 66646 || | ||| ||| ||||| ||||||||||| || || |||||||| || |||||| Sbjct 101512 GCTCTGATACGGTGCACATTGAGACCAATACCGCCAGCGGTCTTCGAAATCATCGCACAA 101453 Query 66647 TCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCAT 66706 | || | | || || |||||| ||| | || | | |||| |||| Sbjct 101452 GTCTTAAGGGTGTCGTAAATACCCTCAATGCTGTCCTCTTTTGTATCGATGAGGAAGCAA 101393 Query 66707 GAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAG 66766 || || || |||| |||||| | || || || ||||| | ||||| |||||| Sbjct 101392 GACGAGAGCTGTGGTTGAGGTGTGCCTGCATTAAAAAGCGTGGGCGAGGCGTGTGTAAAG 101333 Query 66767 TAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATC 66826 || | | |||||||| ||||| |||| ||| |||| ||||| | || || |||||| Sbjct 101332 TATTTGTTCGACATGTAGTTGTATGTCTGGATAGCAGCCTCAATATCCTCCCCGTGAATC 101273 Query 66827 CCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTT---CGACC-AGCCGATCCTTGAT 66882 || | || ||||| | | | ||| || || | ||||| |||| ||| || Sbjct 101272 CCAACAGCTACGCGCATGATCATATGTTGTGGACGCTCAGCGACCTTGCCG---CTT-AT 101217 Query 66883 ATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 | | | ||| || || || || || |||| ||||||||| ||||||||| || Sbjct 101216 CCGGAGCAGGTACGATCGCTCGAGCGTTTTGAAACCAAAGTATTGGTAATTGAAGTC 101160 Score = 105 bits (116), Expect = 5e-18 Identities = 246/359 (69%), Gaps = 18/359 (5%) Strand=Plus/Minus Query 65807 AAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAAC-G 65865 |||| || || ||||| || || || | ||||| ||||||||||| | ||| | Sbjct 102333 AAAGCATCAGCAAGACCCTGCACACCGACACCGACTGGACGATGACGAGAGTTGCTGTTG 102274 Query 65866 TCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCAC 65925 | | || ||||| || ||||||| |||| ||| || || |||||||| || || Sbjct 102273 TAT-GCTTCAGGAACGGGGTAGTGGTTGACATCAATGATCTTGTTCAAATTTCGGACGAC 102215 Query 65926 CACATGCACGA-TACGTCGCAA-TTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTG 65983 | || |||| | ||| |||| ||||| ||||||| | |||| || | || Sbjct 102214 CGTCTGAACGACTTCGT-GCAACTTGTT-GAAATCATA--------GACGC-CGCGT-TG 102167 Query 65984 CCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCA 66043 | | || | || | || || | || | ||||| | |||||| ||||| | ||| || Sbjct 102166 CACGTCAACG-AAGGTCGGCAACGCCATG-GATGCCAAGTTGCACACAGCGACCTCATCT 102109 Query 66044 GGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTC 66103 || || | || |||| || || ||||||| || || ||| ||||| ||||| ||| Sbjct 102108 GGCGCAGAGTATTCGATGATCTCAGTGCACAAGTTGGAGCTGCGGATGGTTCCCAAGTTC 102049 Query 66104 TGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTC 66162 | || ||||||||||||||||| ||||| || || | ||| | || |||||||||| Sbjct 102048 TTCTGGTTACTCTTGCGATTGCAAGCATCTTTATAAAGCATAAAAGGGTTGCCGGTCTC 101990 >seq482 Length=325002 Score = 143 bits (158), Expect = 2e-29 Identities = 299/437 (68%), Gaps = 9/437 (2%) Strand=Plus/Minus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | |||||||| | || ||||| || | || || | ||||| ||| | Sbjct 233434 GCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCTTTCGCATCCATCTTCTGGCTC 233375 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| || || || |||||||| |||||||| ||| ||| | || || ||||| ||| Sbjct 233374 AAGAAGCGCGGTCTCATGCCCGGCTTGACCTTCTCCAACGAGCTCATCTCCCGCGATGAG 233315 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAAC-GCT-ATCTGGTGAATCGTCCGT 61675 |||||||| ||||| || | || ||| || ||| | | | || | | || Sbjct 233314 GGCATGCACACCGATTTCGCCTGCCTCCTTTTCTCACAGCTCAACAAG--AAGCCTTCGC 233257 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 | || ||| || | | || || |||||| ||| ||||| ||||| || ||| Sbjct 233256 CTGA--AGCC-GTCCGCGCTATCATTACTGAGGCAGTACAAATCGAGCAGGAGTTCTTGA 233200 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 || ||| | || | ||| |||||||||| | ||||| |||| || || |||| Sbjct 233199 GCGAGGCTCTACCATGCAGACTGCTCGGCATGAACTCGGGACTTATGTGCCAATACATTG 233140 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGAT-TTGGGTATGAAGCGGATCTATAATACGAAA 61854 | |||||||| || ||||| || ||| |||| ||| || | || ||| | Sbjct 233139 AGTTTGTTGCTGATCGTCTACTGCTCGCGCTTGGCAATGTCAAGGTT-TACAATGCTGTC 233081 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 ||||| ||||| |||||||| | ||||| || | || ||||||||||| |||||||| Sbjct 233080 AACCCTTTTGACTTCATGGAGAATATTTCCCTCGCCGGAAAGACGAATTTCTTCGAGAAG 233021 Query 61915 CGTGTAGGCGACTATCA 61931 ||||| || ||||| || Sbjct 233020 CGTGTGGGTGACTACCA 233004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564816598480