Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09]
657 sequences; 36,917,822 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq115 219 3e-52
seq482 143 2e-29
>seq115
Length=330173
Score = 219 bits (242), Expect = 3e-52
Identities = 445/657 (68%), Gaps = 8/657 (1%)
Strand=Plus/Minus
Query 66287 GGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAAT 66346
|| || | ||| || |||||||||| ||| || || | |||||| || || ||| |||
Sbjct 101812 GGGCATTCGTGAGGGCACATCAGCGTCCACTCGCCGTTCTGTTCGACTCGCTTCATGAAT 101753
Query 66347 AGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGA 66406
|| || || ||||| | ||| ||||| |||||||| || ||| ||| || |||||||
Sbjct 101752 AGGTCGGGAATCCACAAGGCATAGAAAAGATCGCGAGCACGTGCCTCTTCTTTGCCGTGG 101693
Query 66407 TTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCG 66466
|| || | || || | | | | || || || |||||||| || ||||| |||||
Sbjct 101692 TTCTTTCTCAGATCCAACCAGTTGATGACATCTGCGTGCCATGGCTCGAGGTAAATGGCA 101633
Query 66467 AACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACA 66526
|| | || ||| ||| |||||||| |||||||||||||| || |||||||
Sbjct 101632 AATGCACCAGGACGCTTGTTTCCACCTTGATCGACGTAGCGAGCAGTCGCGTCGAAGACA 101573
Query 66527 CGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT 66586
|| | ||| || || |||||||| ||| |||| || || || | ||| |||||
Sbjct 101572 CGGAGCATGGGAACAAGCCCGTTTGATGTGCCGTTTGTTCCTCCAATGTATGATCCGGTG 101513
Query 66587 GCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA 66646
|| | ||| ||| ||||| ||||||||||| || || |||||||| || ||||||
Sbjct 101512 GCTCTGATACGGTGCACATTGAGACCAATACCGCCAGCGGTCTTCGAAATCATCGCACAA 101453
Query 66647 TCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCAT 66706
| || | | || || |||||| ||| | || | | |||| ||||
Sbjct 101452 GTCTTAAGGGTGTCGTAAATACCCTCAATGCTGTCCTCTTTTGTATCGATGAGGAAGCAA 101393
Query 66707 GAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAG 66766
|| || || |||| |||||| | || || || ||||| | ||||| ||||||
Sbjct 101392 GACGAGAGCTGTGGTTGAGGTGTGCCTGCATTAAAAAGCGTGGGCGAGGCGTGTGTAAAG 101333
Query 66767 TAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATC 66826
|| | | |||||||| ||||| |||| ||| |||| ||||| | || || ||||||
Sbjct 101332 TATTTGTTCGACATGTAGTTGTATGTCTGGATAGCAGCCTCAATATCCTCCCCGTGAATC 101273
Query 66827 CCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTT---CGACC-AGCCGATCCTTGAT 66882
|| | || ||||| | | | ||| || || | ||||| |||| ||| ||
Sbjct 101272 CCAACAGCTACGCGCATGATCATATGTTGTGGACGCTCAGCGACCTTGCCG---CTT-AT 101217
Query 66883 ATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939
| | | ||| || || || || || |||| ||||||||| ||||||||| ||
Sbjct 101216 CCGGAGCAGGTACGATCGCTCGAGCGTTTTGAAACCAAAGTATTGGTAATTGAAGTC 101160
Score = 105 bits (116), Expect = 5e-18
Identities = 246/359 (69%), Gaps = 18/359 (5%)
Strand=Plus/Minus
Query 65807 AAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAAC-G 65865
|||| || || ||||| || || || | ||||| ||||||||||| | ||| |
Sbjct 102333 AAAGCATCAGCAAGACCCTGCACACCGACACCGACTGGACGATGACGAGAGTTGCTGTTG 102274
Query 65866 TCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCAC 65925
| | || ||||| || ||||||| |||| ||| || || |||||||| || ||
Sbjct 102273 TAT-GCTTCAGGAACGGGGTAGTGGTTGACATCAATGATCTTGTTCAAATTTCGGACGAC 102215
Query 65926 CACATGCACGA-TACGTCGCAA-TTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTG 65983
| || |||| | ||| |||| ||||| ||||||| | |||| || | ||
Sbjct 102214 CGTCTGAACGACTTCGT-GCAACTTGTT-GAAATCATA--------GACGC-CGCGT-TG 102167
Query 65984 CCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCA 66043
| | || | || | || || | || | ||||| | |||||| ||||| | ||| ||
Sbjct 102166 CACGTCAACG-AAGGTCGGCAACGCCATG-GATGCCAAGTTGCACACAGCGACCTCATCT 102109
Query 66044 GGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTC 66103
|| || | || |||| || || ||||||| || || ||| ||||| ||||| |||
Sbjct 102108 GGCGCAGAGTATTCGATGATCTCAGTGCACAAGTTGGAGCTGCGGATGGTTCCCAAGTTC 102049
Query 66104 TGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTC 66162
| || ||||||||||||||||| ||||| || || | ||| | || ||||||||||
Sbjct 102048 TTCTGGTTACTCTTGCGATTGCAAGCATCTTTATAAAGCATAAAAGGGTTGCCGGTCTC 101990
>seq482
Length=325002
Score = 143 bits (158), Expect = 2e-29
Identities = 299/437 (68%), Gaps = 9/437 (2%)
Strand=Plus/Minus
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| ||||| | |||||||| | || ||||| || | || || | ||||| ||| |
Sbjct 233434 GCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCTTTCGCATCCATCTTCTGGCTC 233375
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
||||| || || || |||||||| |||||||| ||| ||| | || || ||||| |||
Sbjct 233374 AAGAAGCGCGGTCTCATGCCCGGCTTGACCTTCTCCAACGAGCTCATCTCCCGCGATGAG 233315
Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAAC-GCT-ATCTGGTGAATCGTCCGT 61675
|||||||| ||||| || | || ||| || ||| | | | || | | ||
Sbjct 233314 GGCATGCACACCGATTTCGCCTGCCTCCTTTTCTCACAGCTCAACAAG--AAGCCTTCGC 233257
Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735
| || ||| || | | || || |||||| ||| ||||| ||||| || |||
Sbjct 233256 CTGA--AGCC-GTCCGCGCTATCATTACTGAGGCAGTACAAATCGAGCAGGAGTTCTTGA 233200
Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795
|| ||| | || | ||| |||||||||| | ||||| |||| || || ||||
Sbjct 233199 GCGAGGCTCTACCATGCAGACTGCTCGGCATGAACTCGGGACTTATGTGCCAATACATTG 233140
Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGAT-TTGGGTATGAAGCGGATCTATAATACGAAA 61854
| |||||||| || ||||| || ||| |||| ||| || | || ||| |
Sbjct 233139 AGTTTGTTGCTGATCGTCTACTGCTCGCGCTTGGCAATGTCAAGGTT-TACAATGCTGTC 233081
Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914
||||| ||||| |||||||| | ||||| || | || ||||||||||| ||||||||
Sbjct 233080 AACCCTTTTGACTTCATGGAGAATATTTCCCTCGCCGGAAAGACGAATTTCTTCGAGAAG 233021
Query 61915 CGTGTAGGCGACTATCA 61931
||||| || ||||| ||
Sbjct 233020 CGTGTGGGTGACTACCA 233004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397564816598480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |