Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq268 340 1e-88 seq171 111 1e-19 >seq268 Length=30626 Score = 340 bits (376), Expect = 1e-88 Identities = 1249/1925 (65%), Gaps = 116/1925 (6%) Strand=Plus/Minus Query 65105 GCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGGCCAGCACGCCAAGCATAGAAA 65164 || ||| |||| | |||||||||||| || ||||| | ||| ||| || ||| Sbjct 28968 GCAGCCATGGTTCGAAGATAGTACATTCCAGTCTTCAAGCCCAATTTCCAGCCAGCAAAA 28909 Query 65165 TGCATCGATGATAATTTTGCATAAT-TCGGCTCGGCCACATGCATATTCAACGACTGACT 65223 ||||| || | | ||||||| | | ||||| || || || ||||| |||| Sbjct 28908 TGCATGGACG-TGATTTTGCCCATGGTAGGCTCCTTCATGTGAATGTTCAAGCTCTGAGA 28850 Query 65224 CTGATCGATGTAACG-ACCACGATCTGCAGCCATGTCAATGATACGACGTCCCGATATCT 65282 |||||||| |||| ||||||||| || ||||| ||||| |||| |||| Sbjct 28849 TTGATCGATA-AACGCACCACGATCGGCGGCCATTGTGATGATGGTACGTTGACTGATCT 28791 Query 65283 CCCAGACGGTCTTGTACAGGCGACGT-ACCTCAATTGGAATCTCCTCAATGTCCTGGACT 65341 |||||||||||||||| || | | | | ||| || || | ||||| || | Sbjct 28790 CCCAGACGGTCTTGTAGAGA-GCCTTGATGTCATCGGGGATGTTGGGAATGTTTTGAATA 28732 Query 65342 GAACCACGACGTGCAATAATGCGATTACGCATCGACTCTGACCACAAACCCAAATCGATA 65401 ||||||| ||||| |||||||| ||| || ||||| | ||||| |||| Sbjct 28731 GAACCACCCTCGGCAATGATGCGATTCTTCATATTGTCAGACCAGAGACCCATCTCGACG 28672 Query 65402 AGATG-TTGA--ACCAAGTGACGATTGATGACTTGGAACTCGCCGGACAGTACACGACGG 65458 |||| |||| | | | || | |||| ||||||||| ||||| | || ||||| || Sbjct 28671 AGATCCTTGAGTAGCCA-TG--GGTTGACGACTTGGAATTCGCCAGCAAGCACACGTCGT 28615 Query 65459 ACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTA 65518 |||||||| ||||| ||||| || | ||| || ||| |||||||| | || Sbjct 28614 GAGTAGATGTTCGACGTATATGGTTCGAAACACTCATTGAAGCCCAGAATTTGAGATGTG 28555 Query 65519 GATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTG 65578 || ||||||||||| || || || || | ||||| || | |||| | ||| || | Sbjct 28554 GAGGCAGTTGGCATTGGGGCCACTAAAAGCGAGTTGCGGACGCCGTGCTTTTTTATATCA 28495 Query 65579 ----TGACGCAATTC--GTCCCAGTTCCACATCGGTTTATCGTCGACATCCACGGGCCAC 65632 ||| ||| | ||||||| | ||| ||| | || ||| |||| Sbjct 28494 GCCTTGAGCGAATCCCAGTCCCAG----AGATCTGTTGGT-GTG-------ACGTTCCAC 28447 Query 65633 ATATCCTGTTGCAGGGTTCC----GATACTGGCCGGTGAACCGAGGAAACTATCGTACAC 65688 || || | ||| ||| | || |||||||| || || | | | |||| Sbjct 28446 ATGTCATATTGTAGGATACCTTGCGATACTGGA----GAGCCCTTGTAGGATTGGTACGT 28391 Query 65689 TCCCTCCTCCTTGGCAAGTTGACAGCTGGTC-TCGAGTGCGGCAAAATAAATGGTCTCGA 65747 ||||| || | ||||||| ||| | || || || || |||||||| |||| Sbjct 28390 ACCCTCTTCTTGTGCAAGTTTGCAGGAAGAGGTCAAG-GCAGCGTGGTAAATGGTTTCGA 28332 Query 65748 AAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAA 65807 | || | ||| || | ||| ||| |||| | |||| || | | || | Sbjct 28331 AGATTTGAATATTGAGCTTCTTTGCTTCAGGAGACTCGAAAGGCAGACGAAGCGCGAGGA 28272 Query 65808 AAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAAC-GT 65866 ||| || || ||||| || || |||| |||| ||||||||||| | ||| || Sbjct 28271 AAGCATCAGCAAGACCCTGTACGCCAACTCCGACTGGACGATGACGGGAGTTGCTGTTGT 28212 Query 65867 CTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACC 65926 | || ||||| ||||| |||| ||||| ||| || || |||||| ||||| | || Sbjct 28211 AT-GCTTCAGGAACAGGATAGTGATTGACATCAATGATCTTATTCAAGTTGCGGATGACA 28153 Query 65927 ACATGCACGA-TACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCC 65985 || | | ||| |||| | | |||||| | |||| || | | | Sbjct 28152 GTCTGGGTAACTTCGT-GCAACTTCTGGAAATCGTA--------GACGC-CGCGTTGGAC 28103 Query 65986 GGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGG 66045 | | ||||| | ||||| || | |||||| | |||||| ||||| | ||| || || Sbjct 28102 GT---CAACAAAGGTCGGAAGTGCCATAGATGCCAAGTTGCATACAGCAACCTCATCTGG 28046 Query 66046 AGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTG 66105 || | ||||| | || |||||||||| |||| || ||| ||||| |||| |||| Sbjct 28045 TGCAGAGTACTCAATGATCTCGGTGCACAAATTAGAGCTGCGAATGGTTCCCAGGTTCTT 27986 Query 66106 TTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAAC 66165 || || ||||| |||||||| || || ||||| | |||| | ||| |||| ||||| Sbjct 27985 CTGGTTGCTCTTCCGATTGCAGGCGTCTTTGTAGAGCATGAAAGGATTGCCAGTCTCGGT 27926 Query 66166 TTGGGACTCAATGATGGCGTGCCAAAG---------------AG---CGCGT-----GCC 66202 |||| | | ||||| | |||||| || |||| ||| Sbjct 27925 CTGGGCTTGTAGAATGGCATACCAAAGCTTTTGGGCACGAATAGTCTCGCGACCACGGCC 27866 Query 66203 TTC--------ACC--------GTACGTACC---GCCCTAC-CTTTGCGTTCG---TAAT 66239 ||| ||| || | ||| | | || ||| | || || | Sbjct 27865 TTCTTTCTCATACCTGGAAGCTGTTAGCACCAATGTCACACACTTCACTGTCAACTTACT 27806 Query 66240 GTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTG 66299 |||||| ||| ||| | || || ||||||||| || | || |||| ||| | Sbjct 27805 TTTCGTATAGGGCCTCGTATTCGTCGCCATATACTTCGGCAAGGCCAGGGCACTCGTGAG 27746 Query 66300 GACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCC 66359 | |||||||||| ||| || | | |||||| ||||| ||| || || || || |||| Sbjct 27745 GGCACATCAGCGTCCATTCGGCGTTCTGTTCAACACGCTTCATGAACAGGTCTGGAATCC 27686 Query 66360 AGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGT 66419 | | ||||||||| ||||| || || || ||| || | ||||| || || | || || Sbjct 27685 ACAAGGCGTAGAAAAGATCACGAGCACGCGCCTCTTCTTTACCGTGGTTCTTTCTCAGGT 27626 Query 66420 CGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATAC 66479 | | | | |||||||||||||||||||| ||||| ||||| ||||||| || || Sbjct 27625 CCAACCAGTTGAAGATGTCGGCATGCCATGGCTCCAGATAGATTGCGAACGCACCAGGAC 27566 Query 66480 GTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTA 66539 | ||| ||||| ||||| ||||||||||| | ||| ||||| | ||| || | Sbjct 27565 GCTTGTTTCCACCCTGGTCAACGTAGCGAGCAGTCGCATCGAAAACACGGAGCATAGGAA 27506 Query 66540 CGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGT 66599 | || || || ||| |||| || || || | ||| ||||| || || || || Sbjct 27505 CTAGTCCATTGGATGTGCCGTTTGTTCCTCCAATGTATGATCCAGTGGCTCGGATGCGGT 27446 Query 66600 GAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA--TCGGCCACTGT 66657 | || || |||||||| || || || ||||| ||||| ||||||| | | | ||| Sbjct 27445 GCACGTTGAGACCAATGCCGCCAGCGGTCTTTGAGATCATAGCACAAGTTTTGAGAGTGT 27386 Query 66658 CCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTG 66717 | | | || || |||||| ||| |||| ||| | || |||| || |||||| Sbjct 27385 C--GTAGATACCCTCAATGCTGTCCTCCTTCATGTCAACAAGAAAGCAGGAGGAAAGTTG 27328 Query 66718 GGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGA 66777 |||| |||||| | || ||| ||||| || | ||| ||||| ||||| | || || Sbjct 27327 CGGTTGAGGTGTGCCTGCATTGAAAAGGGTAGGCGAAGCATGCGTGAAGTATTTGCTGGA 27268 Query 66778 CATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CAC 66836 |||||| ||||| |||| ||| |||| ||||||| || || || || || | | ||| Sbjct 27267 CATGTAGTTGTAAGTCTGAATGGCAGCTTCAATGTCCTCTCCGTGGATGCCAACAGCCAC 27208 Query 66837 ATCGCATCAGGAGGTATTGAGGCCGTT---CGACC-AGCCGATCCTTGATATGCATTAAG 66892 | ||||| | | || ||| || || | ||||| |||| ||| || ||| || | Sbjct 27207 A-CGCATGATCATGTGTTGTGGACGCTCAGCGACCTTGCCG---CTT-ATTCGCAGTAGG 27153 Query 66893 TAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACG 66952 || || || || || ||||||| |||||||| ||| |||||||| || | | || Sbjct 27152 TACGATCGCTCAAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCTCTATCGTAGACA 27093 Query 66953 ATGGC 66957 ||||| Sbjct 27092 ATGGC 27088 >seq171 Length=70297 Score = 111 bits (122), Expect = 1e-19 Identities = 292/437 (67%), Gaps = 9/437 (2%) Strand=Plus/Minus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 ||||| || | ||||| || | ||||||||||| | || || | || || ||| | Sbjct 54867 GCATTCGCCGCTGTCGAAGGCATCTTTTTCAGTGGTGCTTTCGCATCCATTTTCTGGCTC 54808 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||||||||| || |||||||| ||||||| ||| ||| | || || ||||||||| Sbjct 54807 AAGAAACGTGGTCTCATGCCCGGCTTGACCTTTTCCAACGAGCTCATCTCTCGCGACGAG 54748 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAAC-GCT-ATCTGGTGAATCGTCCGT 61675 || ||||| || ||||| | | || ||| || || | | ||| | | | Sbjct 54747 GGAATGCACACCGACTTTGCCTGTCTCCTTTTCTCACAACTCAAC--AAGAAGCCTGCTC 54690 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 | || ||| ||| | | || | ||||| || || || || ||||| ||| Sbjct 54689 CTGA--AGC-TGTCCGCGCCATCATCACGGAGGCAGTTCAAATTGAGCAAGAATTCTTGA 54633 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 || || | || | ||| |||||||||||| || || |||| || || |||| Sbjct 54632 GCGAGGCACTACCATGCAGACTGCTCGGCATGAATTCAGGGCTCATGTGCCAATACATTG 54573 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCG-ATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 | ||||| || || ||||| ||| | | | | || ||| || |||||||| | Sbjct 54572 AGTTTGTCGCTGATCGTCTCTTGCTTGCACTCGGCAATGTCAAGG-TCTATAATGCTGTG 54514 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 || || || || |||||||| | || || || | || ||||| ||||| ||||||||| Sbjct 54513 AATCCCTTCGACTTCATGGAGAACATCTCTCTCGCCGGAAAGACAAATTTCTTCGAGAAA 54454 Query 61915 CGTGTAGGCGACTATCA 61931 ||||| || || || || Sbjct 54453 CGTGTCGGTGATTACCA 54437 Score = 107 bits (118), Expect = 2e-18 Identities = 225/332 (68%), Gaps = 5/332 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || ||||| |||||||| ||||| || || |||||||| | || ||| | ||| | Sbjct 55331 ATCTGGCGTATGTACAAGAAGGCCATGGCCTCATTCTGGACTGCCGAAGAGATTGATCTC 55272 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 |||||||| | |||||| | || | | ||| || |||| ||||| Sbjct 55271 TCCAAAGATGTTCCAGACTGGAACAACCGCCTCAACGA-CGACGAACGCTTCTTCATCTC 55213 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || | | || ||||| || || |||||||| || ||||||||||| | | || || Sbjct 55212 CCACATCCTCGCATTCTTCGCAGCATCGGACGGCATTGTCAATGAGAACCTTCTCGAGCG 55153 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| | || || || || | || || || || |||||||| |||||||| ||||| Sbjct 55152 ATTCAGCAATGAAGTCCAGGTTCCAGAAGCTCGATGCTTCTACGGTTTCCAGATCGCCAT 55093 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 ||||||| | ||||| |||| ||| |||||||||| || ||||| |||| Sbjct 55092 GGAGAATATTCACTCCGAGACATACTCCCTTCTCATCGAGACACTGATCAGCGAGCCCAA 55033 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGA 61414 | |||| | |||||||| || ||||||| Sbjct 55032 GCAACGCACATATTTGTTCAACGCTATCGAGA 55001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565359278800