Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq971 167 1e-38 seq883 167 1e-38 >seq971 Length=1140195 Score = 167 bits (184), Expect = 1e-38 Identities = 134/162 (83%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 |||||||||||| || |||| ||| ||||||||||||||| |||||| || ||||||||| Sbjct 411766 TCGACCGATCCTAATATCTTTGGAAGGATTTGAGTAAGAGTATAGCTATTAGGACCCGAA 411825 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||| || |||||| | | |||||||| |||| |||||||||||| || |||||| || Sbjct 411826 AGATAGTAAACTATACGTAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTTATAG 411885 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679 ||||| ||| ||||||||||| |||||| |||||||| Sbjct 411886 TAGTTCTAACGTATAAATCGATCGTTAAATTTACGTATAGGG 411927 >seq883 Length=161138 Score = 167 bits (184), Expect = 1e-38 Identities = 134/162 (83%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 |||||||||||| || |||||||| ||||||||||||||| |||||| || |||||||| Sbjct 138879 TCGACCGATCCTAATATCTTCGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAA 138938 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||| || |||||| | | |||||||| |||| |||||||||||| || |||||| || Sbjct 138939 AGATAGTAAACTATACGTAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTTATAG 138998 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679 ||||| ||| ||||||||||| |||||| |||||||| Sbjct 138999 TAGTTCTAACGTATAAATCGATCGTTAAATTTACGTATAGGG 139040 Score = 167 bits (184), Expect = 1e-38 Identities = 134/162 (83%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 |||||||||||| || |||||||| ||||||||||||||| |||||| || |||||||| Sbjct 141360 TCGACCGATCCTAATATCTTCGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAA 141301 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||| || |||||| | | |||||||| |||| |||||||||||| || |||||| || Sbjct 141300 AGATAGTAAACTATACGTAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTTATAG 141241 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679 ||||| ||| ||||||||||| |||||| |||||||| Sbjct 141240 TAGTTCTAACGTATAAATCGATCGTTAAATTTACGTATAGGG 141199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079978292600