Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31]
1,012 sequences; 55,125,376 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq971 167 1e-38
seq883 167 1e-38
>seq971
Length=1140195
Score = 167 bits (184), Expect = 1e-38
Identities = 134/162 (83%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577
|||||||||||| || |||| ||| ||||||||||||||| |||||| || |||||||||
Sbjct 411766 TCGACCGATCCTAATATCTTTGGAAGGATTTGAGTAAGAGTATAGCTATTAGGACCCGAA 411825
Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637
|||| || |||||| | | |||||||| |||| |||||||||||| || |||||| ||
Sbjct 411826 AGATAGTAAACTATACGTAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTTATAG 411885
Query 638 CGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679
||||| ||| ||||||||||| |||||| ||||||||
Sbjct 411886 TAGTTCTAACGTATAAATCGATCGTTAAATTTACGTATAGGG 411927
>seq883
Length=161138
Score = 167 bits (184), Expect = 1e-38
Identities = 134/162 (83%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577
|||||||||||| || |||||||| ||||||||||||||| |||||| || ||||||||
Sbjct 138879 TCGACCGATCCTAATATCTTCGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAA 138938
Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637
|||| || |||||| | | |||||||| |||| |||||||||||| || |||||| ||
Sbjct 138939 AGATAGTAAACTATACGTAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTTATAG 138998
Query 638 CGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679
||||| ||| ||||||||||| |||||| ||||||||
Sbjct 138999 TAGTTCTAACGTATAAATCGATCGTTAAATTTACGTATAGGG 139040
Score = 167 bits (184), Expect = 1e-38
Identities = 134/162 (83%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577
|||||||||||| || |||||||| ||||||||||||||| |||||| || ||||||||
Sbjct 141360 TCGACCGATCCTAATATCTTCGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAA 141301
Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637
|||| || |||||| | | |||||||| |||| |||||||||||| || |||||| ||
Sbjct 141300 AGATAGTAAACTATACGTAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTTATAG 141241
Query 638 CGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679
||||| ||| ||||||||||| |||||| ||||||||
Sbjct 141240 TAGTTCTAACGTATAAATCGATCGTTAAATTTACGTATAGGG 141199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079978292600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |