Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq400 239 4e-58 seq721 98.7 8e-16 >seq400 Length=377941 Score = 239 bits (264), Expect = 4e-58 Identities = 482/705 (68%), Gaps = 14/705 (2%) Strand=Plus/Plus Query 66242 TCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGA 66301 |||||||| |||||| ||||| | | |||| |||| || |||| ||| || Sbjct 294246 TCGTAGAGAGCTTCGAACTCGTCACCGTAGATATCGGCAAGACCAGGGCACTCGTGAGGG 294305 Query 66302 CACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAG 66361 ||||| || | ||| || |||| |||||| || || ||| || || || || ||||| Sbjct 294306 CACATGAGAGTCCAGTCGCCATTCTGTTCGACGCGCTTCATGAACAGGTCGGGAATCCAC 294365 Query 66362 AGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCG 66421 | ||| ||||| ||||| || || || || || ||||||| || || | || || Sbjct 294366 AAGGCATAGAAAAGATCACGAGCACGCGCTTCTTCTTTGCCGTGGTTCTTTCTCAGATCT 294425 Query 66422 AGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGT 66481 | | | |||| ||||| |||||||| || |||||||||||||| | || ||| Sbjct 294426 AACCAGTTGAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAATGCACCAGGACGC 294485 Query 66482 TTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACG 66541 ||| ||||||||| || ||||||||||| || |||||||| | ||| || || Sbjct 294486 TTGTTGCCACCTTGATCAACGTAGCGAGCAGTCGCGTCAAAGACACGGAGCATAGGAACA 294545 Query 66542 AGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGA 66601 || ||||| ||| |||| || || || | ||| ||||| || || || || Sbjct 294546 AGACCGTTCGATGTGCCGTTTGTTCCTCCAATGTATGATCCAGTGGCTCGGATGCGATGT 294605 Query 66602 ACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCC 66659 | || || || |||||||| || ||||| || || ||||||| || | |||| Sbjct 294606 ATGTTAAGGCCGATACCACCAGCGGTCTTTGAAATCATAGCACAAGTCTTGAGGGTGTC- 294664 Query 66660 GGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGG 66719 | | || || || ||| ||| |||| || | |||| |||| || ||||| | Sbjct 294665 -GTAGATACCCTCGATGCTGTCCTCCTTCGTGTCAATGAGGAAGCAAGACGAGAGTTGCG 294723 Query 66720 GTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACA 66779 ||| |||||| | || ||| || || || | |||||||| ||||| | | ||||| Sbjct 294724 GTTGAGGTGTGCCTGCGTTGAAAAGTGTAGGGGAGGCGTGCGTGAAGTATTTGTTAGACA 294783 Query 66780 TGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACAT 66838 |||| ||||| |||| ||| ||| ||||||| || || ||||| |||| || |||| Sbjct 294784 TGTAGTTGTATGTCTGTATGGCAGATTCAATGTCCTCTCCGTGAATGCCGACTGCCACA- 294842 Query 66839 CGCATCAGGAGGTATTGAGGCCGTT---CGACC-AGCCGATCCTTGATATGCATTAAGTA 66894 ||||| | | | ||| || || | ||||| |||| ||| || | | || ||| Sbjct 294843 CGCATGATCATATGTTGTGGACGCTCAGCGACCTTGCCG---CTT-ATTCGGAGTAGGTA 294898 Query 66895 GGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 || || ||||| ||||||| |||||||| |||||||||||| Sbjct 294899 TGATCGCTCCAGAGTCTTGAAGCCAAAGTATTGGTAATTGAAATC 294943 Score = 154 bits (170), Expect = 1e-32 Identities = 729/1131 (64%), Gaps = 48/1131 (4%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||||||||| | | ||| ||| |||| | || |||||||| || || Sbjct 293051 ATCGACAGTGAACTGGATGGGTGCTGAAGCAGCCATGGTTCGGAGGTAGTACATTCCAGT 293110 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 |||||| || |||| || || ||||| || | |||| |||| | |||||| Sbjct 293111 CTTGAGACCCATCTTCCAACCAGCAAAGTGCATGGAAG-TAATCTTGCCCATGGTCGGCT 293169 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || ||||| |||| ||||| ||| | |||||||| ||||||| Sbjct 293170 CTTTCATGTGAATGTTCAAGCTCTGAGATTGATCAATGAAGGCGCCACGATCCGCAGCCA 293229 Query 65256 TGTCAATGATACGACGTCCCGAT-ATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCA 65314 || || || ||| | | | || ||||| || |||||||| ||| | ||| Sbjct 293230 TGGTGATAATGGTACG-CTGGCTGATTTCCCAAACCGTCTTGTAAAGGGCTTTGATATCA 293288 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 ||||| | ||||| ||||| ||||||| |||||| || ||||| ||| Sbjct 293289 TCGGGAATATTAGGAATGTTCTGGATAGAACCACCCTCTGCAATGATACGATTCTTCATG 293348 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGG 65434 || ||||| | ||||| |||| |||| || | || | |||| ||||||| Sbjct 293349 TTGTCCGACCAAAGACCCATCTCGACGAGATCTTTGAGCAGCCATGGGTTGACGACTTGG 293408 Query 65435 AACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCA 65494 || || || | || |||||||| ||||| || |||||| || || ||| | || Sbjct 293409 AATTCCCCAGCAAGCACACGACGAGAGTAGATATTTGACGTGTATGGCTCGAAGCACTCG 293468 Query 65495 GTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTT 65554 || || |||||||| | || || ||||||||||| ||||| || | | |||||| Sbjct 293469 TTGAAACCGAGAATTTGAGATGTGGAAGCAGTTGGCATAGGAGCAACAAGAAGTGAGTTG 293528 Query 65555 CGCAATCCGTTCATTTCAAT----GTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTT 65610 || | |||| | | | || | ||| || | |||||||| ||| | | | Sbjct 293529 CGAATACCGTGCTTCTTGATATCAGCCTTGA-GCGA---GTCCCAGTCCCAGA--GAT-- 293580 Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGG----CCGGTG 65666 ||| | | ||| |||||| || | || || | || |||| | || | Sbjct 293581 -CCGTAG-GAGTGACGTTCCACATGTCGTACTGGAGAATACC----CTGGGAAACTGGAG 293634 Query 65667 AACCGAGGAAACTATCGTACACTCCCTCCTCCTTG-GCAAG-TTGACAGCTGGTCTCGAG 65724 | || | | | | ||| | ||| || |||| ||||| ||| | | || || Sbjct 293635 AGCCCTCGTAGGTTTTGTA-TGTGCCTTCTTCTTGTGCAAGCTTGCAGGAAGAGGTCAAG 293693 Query 65725 TGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTC 65784 |||||| |||||||||||||| || | || || | |||||| ||| Sbjct 293694 -GCGGCATGGTAAATGGTCTCGAAGATTTGAATGTTGAGCTTCTTTGCCTCGGGAGACTC 293752 Query 65785 GTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGG 65844 | | |||| | | | |||| || || ||||| || || |||| ||||| ||| Sbjct 293753 GAAGGGCAGGCGAAGAGCAAGGAAAGCATCAGCAAGACCCTGTACACCAACACCGACGGG 293812 Query 65845 ACGATGACGCAAATTG-GAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAA 65903 ||| ||||| | ||| || | || || || || || |||| |||| || || | Sbjct 293813 ACGGTGACGGGAGTTGCTGTTGTAT-GCTTCGGGAACGGGATAGTGGTTGACGTCAATGA 293871 Query 65904 TGCGATTCAAATTGCGTGTCACCACATGCACGA-TACGTCGCAA-TTGTTCGAAATCAAA 65961 | ||||| ||||| | || || |||| | ||| |||| ||||| ||||||| | Sbjct 293872 TCTTGTTCAAGTTGCGAATGACAGTCTGGACGACTTCGT-GCAACTTGTT-GAAATCATA 293929 Query 65962 ATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAG 66021 |||| | | || | || | || |||| || | || | ||||| | Sbjct 293930 --------GACG--CCGCGTTGAACGTCAAC-GAAGGTTGGCAAAGCCATG-GATGCCAA 293977 Query 66022 GTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACT 66081 |||||| ||||| | ||| ||||| || | ||||| | || || ||||||||||| Sbjct 293978 GTTGCAAACAGCAACCTCATCAGGCGCAGAGTACTCAATGATCTCAGTGCACAGATTGGA 294037 Query 66082 GCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACAT 66141 || ||| ||||| ||||| |||| ||||| |||||||| ||||| ||||| ||||| | Sbjct 294038 GCTGCGAATGGTTCCCAAGTTCTTCTGATTGCTCTTGCGGTTGCAAGCATCTTTGTAAAG 294097 Query 66142 CATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAG 66192 |||| | || |||| ||||| |||| | || ||||||| ||| || Sbjct 294098 CATGAAAGGGTTGCCAGTCTCGGTCTGGGCTTGAAGAATGGCGTACCAGAG 294148 >seq721 Length=773014 Score = 98.7 bits (108), Expect = 8e-16 Identities = 289/437 (66%), Gaps = 9/437 (2%) Strand=Plus/Minus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 ||||| || | ||||||||| | || ||||| || | ||||| | ||||| ||| | Sbjct 707981 GCATTCGCAGCTGTCGAGGGTATCTTCTTCAGCGGCGCCTTTGCATCTATCTTCTGGCTC 707922 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| || || || |||||||| |||||||| ||| || | || || ||||||||| Sbjct 707921 AAGAAGCGCGGTCTCATGCCCGGCTTGACCTTCTCCAACGAACTCATCTCTCGCGACGAG 707862 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAAC-GCT-ATCTGGTGAATCGTCCGT 61675 || ||||| || ||||| | || ||| || ||| | | ||| | | || Sbjct 707861 GGAATGCACACCGACTTTGCCTGCCTCCTCTTCTCACAGCTCAAC--AAGAAGCCTTCGC 707804 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 | || ||| || | | || | ||||| ||| || || |||||||| ||| Sbjct 707803 CTGA--AGC-CGTCCGCGCCATCATCACCGAGGCAGTACAAATTGAGCAGGAATTCTTGA 707747 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 || || || || | | | |||||||||| | | || |||| ||||| || | Sbjct 707746 GCGAAGCATTACCATGCAGATTGCTCGGCATGAACTCTACCCTCATGTGCCAGTACATCG 707687 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCG-ATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 | |||||||| || ||||| ||| | | |||| ||| || | || || | Sbjct 707686 AGTTTGTTGCTGATCGTCTCTTGCTTGCGCTTGGCAATGTTAAGG-TTTACAACGCCGTC 707628 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 ||||| || || |||||||| | || || || | || ||||| || ||||||||||| Sbjct 707627 AACCCCTTCGACTTCATGGAGAACATCTCTCTCGCCGGAAAGACTAACTTTTTCGAGAAG 707568 Query 61915 CGTGTAGGCGACTATCA 61931 || || || || || || Sbjct 707567 CGCGTCGGTGATTACCA 707551 Score = 95.1 bits (104), Expect = 1e-14 Identities = 222/332 (67%), Gaps = 5/332 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||||||||||||| ||||| || || || ||||| | || ||| ||||| | Sbjct 708447 ATCTGGCGCATGTACAAGAAGGCAATGGCCTCATTTTGGACCGCCGAAGAGATCGATCTC 708388 Query 61147 TCCAAAGACATGAATGACTGG---GAGCG-TTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||||||| | |||||| | || | | ||| || |||| |||||| Sbjct 708387 TCCAAAGACGTTCCAGACTGGAACAACCGCCTGAACGA-CGACGAACGCTTTTTCATCTC 708329 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||| | | || || || || || ||||| || |||||||| ||||| | | ||||| Sbjct 708328 ACACATTCTCGCATTTTTCGCAGCATCGGATGGCATCGTCAACGAGAACCTCCTCGAACG 708269 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| | || || || || | || || || || || ||||| || || || ||||| Sbjct 708268 TTTTAGCAACGAAGTTCAGGTTCCAGAAGCCCGATGCTTTTACGGTTTTCAAATCGCCAT 708209 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 ||| || |||| || |||| ||| | || ||||| |||| ||||| |||| Sbjct 708208 GGAAAACATCCATTCCGAGACATACTCCCTCCTGATCGAGACGTTGATCAGCGAGCCCAA 708149 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGA 61414 | |||| | | |||||||| ||||||| Sbjct 708148 GCAACGCACATACCTTTTCAATGCTATCGAGA 708117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563096495680