Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17]
1,040 sequences; 62,487,368 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq174 174 7e-41
seq94 165 3e-38
seq464 159 1e-36
seq964 158 5e-36
seq183 156 2e-35
seq162 156 2e-35
seq147 143 1e-31
seq111 143 1e-31
seq120 141 4e-31
>seq174
Length=131737
Score = 174 bits (192), Expect = 7e-41
Identities = 138/165 (84%), Gaps = 3/165 (2%)
Strand=Plus/Minus
Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577
|||||||||||| || |||||||| ||||||||||||||| |||||| || ||||||||
Sbjct 112162 TCGACCGATCCTAATATCTTCGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAA 112103
Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637
|||| || |||||| | |||||||||| |||| |||||||||||| || |||||||| ||
Sbjct 112102 AGATAGTAAACTATACGTGAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTCGTAG 112043
Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679
||||| ||| |||||||||||| | ||||| ||||||||
Sbjct 112042 TAGTTCTAACGTACAAATCGATCGTTAAATAATTTACGTATAGGG 111998
>seq94
Length=138255
Score = 165 bits (182), Expect = 3e-38
Identities = 136/165 (82%), Gaps = 3/165 (2%)
Strand=Plus/Plus
Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577
|||||||||||| || |||||||| |||||| |||||||| |||||| ||| ||||||||
Sbjct 19057 TCGACCGATCCTAATATCTTCGGAAGGATTTAAGTAAGAGTATAGCTATTGAGACCCGAA 19116
Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637
|||| || |||||| | | |||||||| |||| |||||||||||| || |||||| ||
Sbjct 19117 AGATAGTAAACTATACGTAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTTATAG 19176
Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679
||||||| ||| ||||||||||| | ||||| ||||||||
Sbjct 19177 CGGTTCTAACGTATAAATCGATCGTTAAATAATTTACGTATAGGG 19221
>seq464
Length=295148
Score = 159 bits (176), Expect = 1e-36
Identities = 130/157 (83%), Gaps = 3/157 (2%)
Strand=Plus/Minus
Query 525 ATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGT 584
||||| || |||||||| ||||||||||||||| |||||| || |||||||||||| ||
Sbjct 236782 ATCCTAATATCTTCGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAAAGATAGT 236723
Query 585 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCT 644
|||||| | | |||||||| |||| |||||||||||| || |||||||| |||| ||||
Sbjct 236722 AAACTATACGTAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTCGTAGCGATTCT 236663
Query 645 GGCGTGCAAATCGATCGTCA---AATTTGGGTATAGG 678
||| |||||||||||| | ||||| |||||||
Sbjct 236662 AACGTACAAATCGATCGTTAAATAATTTACGTATAGG 236626
>seq964
Length=211353
Score = 158 bits (174), Expect = 5e-36
Identities = 141/176 (80%), Gaps = 3/176 (2%)
Strand=Plus/Minus
Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566
||||| | | |||||||||||| || |||||||| |||||| |||||||| |||||| |
Sbjct 178360 AGGGTCTAGCCTCGACCGATCCTAATATCTTCGGAAGGATTTAAGTAAGAGTATAGCTAT 178301
Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626
| |||||||||||| || |||||| | | ||||| || |||| |||||||||||| ||
Sbjct 178300 TAAGACCCGAAAGATAGTAAACTATACGTAAATAGAGTAAAGCTAGAGGAAACTCTAGTA 178241
Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679
|||||||| ||||||||| ||| |||||||| | | ||||| ||||||||
Sbjct 178240 GAGGCTCGTAGCGGTTCTAACGTATAAATCGATTATTAAATAATTTACGTATAGGG 178185
>seq183
Length=80315
Score = 156 bits (172), Expect = 2e-35
Identities = 134/165 (81%), Gaps = 3/165 (2%)
Strand=Plus/Plus
Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577
|||||||||||| || |||| ||| ||||||||||||||| |||||| || ||||||||
Sbjct 19437 TCGACCGATCCTAATATCTTTGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAA 19496
Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637
|||| || |||||| | |||||||| |||| |||||||||||| || |||||||| ||
Sbjct 19497 AGATAGTAAACTATATATAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTCGTAG 19556
Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679
||||| ||| ||||||||||| | ||||| ||||||||
Sbjct 19557 TAGTTCTAACGTATAAATCGATCGTTAAATAATTTACGTATAGGG 19601
>seq162
Length=94046
Score = 156 bits (172), Expect = 2e-35
Identities = 134/165 (81%), Gaps = 3/165 (2%)
Strand=Plus/Plus
Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577
|||||||||||| || |||| ||| ||||||||||||||| |||||| || ||||||||
Sbjct 14868 TCGACCGATCCTAATATCTTTGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAA 14927
Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637
|||| || |||||| | |||||||| |||| |||||||||||| || |||||||| ||
Sbjct 14928 AGATAGTAAACTATATATAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTCGTAG 14987
Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679
||||| ||| ||||||||||| | ||||| ||||||||
Sbjct 14988 TAGTTCTAACGTATAAATCGATCGTTAAATAATTTACGTATAGGG 15032
>seq147
Length=100605
Score = 143 bits (158), Expect = 1e-31
Identities = 131/165 (79%), Gaps = 3/165 (2%)
Strand=Plus/Plus
Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577
|| ||||||||| || |||| ||| ||||||||||||||| |||||| || ||||||||
Sbjct 32273 TCAACCGATCCTAATATCTTTGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAA 32332
Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637
|||| | |||||| | | |||||||| |||| |||||||||||| || |||||| ||
Sbjct 32333 AGATAATAAACTATACGTAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTTATAG 32392
Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679
||||| ||| ||||||||||| | ||||| ||||||||
Sbjct 32393 TAGTTCTAACGTATAAATCGATCGTTAAATAATTTACGTATAGGG 32437
>seq111
Length=124556
Score = 143 bits (158), Expect = 1e-31
Identities = 131/165 (79%), Gaps = 3/165 (2%)
Strand=Plus/Minus
Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577
|||||||||||| || |||||||| ||||||||||||||| |||||| || ||||||||
Sbjct 113127 TCGACCGATCCTAATATCTTCGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAA 113068
Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637
|||| || |||||| | |||||||| |||| |||||||||||| || |||||| ||
Sbjct 113067 AGATAGTAAACTATATATAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTTATAG 113008
Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679
||||| | ||||||||||| | ||||| ||||||||
Sbjct 113007 TAGTTCTAATATATAAATCGATCGTTAAATAATTTACGTATAGGG 112963
>seq120
Length=451270
Score = 141 bits (156), Expect = 4e-31
Identities = 129/162 (80%), Gaps = 3/162 (2%)
Strand=Plus/Plus
Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580
||||||||| || |||||||| |||||| |||||||| |||||| || |||||||||||
Sbjct 18454 ACCGATCCTAATATCTTCGGAAGGATTTAAGTAAGAGTATAGCTATTAAGACCCGAAAGA 18513
Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640
| || |||||| | | |||||||| |||| |||||||||||| || |||||| || |
Sbjct 18514 TAGTAAACTATACGTAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTTATAGTAG 18573
Query 641 TTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679
|||| | | ||||||||||| | ||||| ||||||||
Sbjct 18574 TTCTAACATATAAATCGATCGTTAAATAATTTACGTATAGGG 18615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079977692000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |