Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq174 174 7e-41 seq94 165 3e-38 seq464 159 1e-36 seq964 158 5e-36 seq183 156 2e-35 seq162 156 2e-35 seq147 143 1e-31 seq111 143 1e-31 seq120 141 4e-31 >seq174 Length=131737 Score = 174 bits (192), Expect = 7e-41 Identities = 138/165 (84%), Gaps = 3/165 (2%) Strand=Plus/Minus Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 |||||||||||| || |||||||| ||||||||||||||| |||||| || |||||||| Sbjct 112162 TCGACCGATCCTAATATCTTCGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAA 112103 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||| || |||||| | |||||||||| |||| |||||||||||| || |||||||| || Sbjct 112102 AGATAGTAAACTATACGTGAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTCGTAG 112043 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679 ||||| ||| |||||||||||| | ||||| |||||||| Sbjct 112042 TAGTTCTAACGTACAAATCGATCGTTAAATAATTTACGTATAGGG 111998 >seq94 Length=138255 Score = 165 bits (182), Expect = 3e-38 Identities = 136/165 (82%), Gaps = 3/165 (2%) Strand=Plus/Plus Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 |||||||||||| || |||||||| |||||| |||||||| |||||| ||| |||||||| Sbjct 19057 TCGACCGATCCTAATATCTTCGGAAGGATTTAAGTAAGAGTATAGCTATTGAGACCCGAA 19116 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||| || |||||| | | |||||||| |||| |||||||||||| || |||||| || Sbjct 19117 AGATAGTAAACTATACGTAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTTATAG 19176 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679 ||||||| ||| ||||||||||| | ||||| |||||||| Sbjct 19177 CGGTTCTAACGTATAAATCGATCGTTAAATAATTTACGTATAGGG 19221 >seq464 Length=295148 Score = 159 bits (176), Expect = 1e-36 Identities = 130/157 (83%), Gaps = 3/157 (2%) Strand=Plus/Minus Query 525 ATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGT 584 ||||| || |||||||| ||||||||||||||| |||||| || |||||||||||| || Sbjct 236782 ATCCTAATATCTTCGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAAAGATAGT 236723 Query 585 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCT 644 |||||| | | |||||||| |||| |||||||||||| || |||||||| |||| |||| Sbjct 236722 AAACTATACGTAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTCGTAGCGATTCT 236663 Query 645 GGCGTGCAAATCGATCGTCA---AATTTGGGTATAGG 678 ||| |||||||||||| | ||||| ||||||| Sbjct 236662 AACGTACAAATCGATCGTTAAATAATTTACGTATAGG 236626 >seq964 Length=211353 Score = 158 bits (174), Expect = 5e-36 Identities = 141/176 (80%), Gaps = 3/176 (2%) Strand=Plus/Minus Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566 ||||| | | |||||||||||| || |||||||| |||||| |||||||| |||||| | Sbjct 178360 AGGGTCTAGCCTCGACCGATCCTAATATCTTCGGAAGGATTTAAGTAAGAGTATAGCTAT 178301 Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 | |||||||||||| || |||||| | | ||||| || |||| |||||||||||| || Sbjct 178300 TAAGACCCGAAAGATAGTAAACTATACGTAAATAGAGTAAAGCTAGAGGAAACTCTAGTA 178241 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679 |||||||| ||||||||| ||| |||||||| | | ||||| |||||||| Sbjct 178240 GAGGCTCGTAGCGGTTCTAACGTATAAATCGATTATTAAATAATTTACGTATAGGG 178185 >seq183 Length=80315 Score = 156 bits (172), Expect = 2e-35 Identities = 134/165 (81%), Gaps = 3/165 (2%) Strand=Plus/Plus Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 |||||||||||| || |||| ||| ||||||||||||||| |||||| || |||||||| Sbjct 19437 TCGACCGATCCTAATATCTTTGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAA 19496 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||| || |||||| | |||||||| |||| |||||||||||| || |||||||| || Sbjct 19497 AGATAGTAAACTATATATAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTCGTAG 19556 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679 ||||| ||| ||||||||||| | ||||| |||||||| Sbjct 19557 TAGTTCTAACGTATAAATCGATCGTTAAATAATTTACGTATAGGG 19601 >seq162 Length=94046 Score = 156 bits (172), Expect = 2e-35 Identities = 134/165 (81%), Gaps = 3/165 (2%) Strand=Plus/Plus Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 |||||||||||| || |||| ||| ||||||||||||||| |||||| || |||||||| Sbjct 14868 TCGACCGATCCTAATATCTTTGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAA 14927 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||| || |||||| | |||||||| |||| |||||||||||| || |||||||| || Sbjct 14928 AGATAGTAAACTATATATAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTCGTAG 14987 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679 ||||| ||| ||||||||||| | ||||| |||||||| Sbjct 14988 TAGTTCTAACGTATAAATCGATCGTTAAATAATTTACGTATAGGG 15032 >seq147 Length=100605 Score = 143 bits (158), Expect = 1e-31 Identities = 131/165 (79%), Gaps = 3/165 (2%) Strand=Plus/Plus Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 || ||||||||| || |||| ||| ||||||||||||||| |||||| || |||||||| Sbjct 32273 TCAACCGATCCTAATATCTTTGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAA 32332 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||| | |||||| | | |||||||| |||| |||||||||||| || |||||| || Sbjct 32333 AGATAATAAACTATACGTAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTTATAG 32392 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679 ||||| ||| ||||||||||| | ||||| |||||||| Sbjct 32393 TAGTTCTAACGTATAAATCGATCGTTAAATAATTTACGTATAGGG 32437 >seq111 Length=124556 Score = 143 bits (158), Expect = 1e-31 Identities = 131/165 (79%), Gaps = 3/165 (2%) Strand=Plus/Minus Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 |||||||||||| || |||||||| ||||||||||||||| |||||| || |||||||| Sbjct 113127 TCGACCGATCCTAATATCTTCGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAA 113068 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||| || |||||| | |||||||| |||| |||||||||||| || |||||| || Sbjct 113067 AGATAGTAAACTATATATAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTTATAG 113008 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679 ||||| | ||||||||||| | ||||| |||||||| Sbjct 113007 TAGTTCTAATATATAAATCGATCGTTAAATAATTTACGTATAGGG 112963 >seq120 Length=451270 Score = 141 bits (156), Expect = 4e-31 Identities = 129/162 (80%), Gaps = 3/162 (2%) Strand=Plus/Plus Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580 ||||||||| || |||||||| |||||| |||||||| |||||| || ||||||||||| Sbjct 18454 ACCGATCCTAATATCTTCGGAAGGATTTAAGTAAGAGTATAGCTATTAAGACCCGAAAGA 18513 Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640 | || |||||| | | |||||||| |||| |||||||||||| || |||||| || | Sbjct 18514 TAGTAAACTATACGTAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTTATAGTAG 18573 Query 641 TTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679 |||| | | ||||||||||| | ||||| |||||||| Sbjct 18574 TTCTAACATATAAATCGATCGTTAAATAATTTACGTATAGGG 18615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079977692000