Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq597 306 3e-78 seq110 98.7 8e-16 >seq597 Length=589508 Score = 306 bits (338), Expect = 3e-78 Identities = 1251/1935 (65%), Gaps = 113/1935 (6%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||||||||| | | ||| ||| |||| | || |||||||| || || Sbjct 283806 ATCGACAGTGAACTGGATGGGTGCTGAAGCAGCCATGGTTCGGAGGTAGTACATTCCAGT 283747 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 |||||| || |||| || || |||||||| | |||| |||| | |||||| Sbjct 283746 CTTGAGACCCATCTTCCAACCAGCAAAGTGCATCGAAG-TAATCTTGCCCATGGTCGGCT 283688 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || ||||| |||| ||||| ||| | |||||||| ||||||| Sbjct 283687 CTTTCATGTGAATGTTCAAGCTCTGAGATTGATCAATGAAGGCGCCACGATCCGCAGCCA 283628 Query 65256 TGTCAATGATACGACGTCCCGAT-ATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313 || || || ||| | | | || ||||| || |||||||| ||| | | | | || Sbjct 283627 TGGTGATAATGGTACG-CTGGCTGATTTCCCAAACCGTCTTGTAAAGG-GCCTTGATATC 283570 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 ||||| | ||||| ||||| ||||||| |||||| || ||||| ||| Sbjct 283569 GTCGGGAATATTAGGAATGTTCTGGATAGAACCACCCTCTGCAATGATACGATTCTTCAT 283510 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTG 65433 || ||||| | ||||| |||| |||| || | || | |||| |||||| Sbjct 283509 GTTGTCCGACCAAAGACCCATCTCGACGAGATCTTTGAGCAGCCATGGGTTGACGACTTG 283450 Query 65434 GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTC 65493 ||| || || | || |||||||| ||||| || |||||| || || ||| | || Sbjct 283449 GAATTCCCCAGCAAGCACACGACGAGAGTAGATATTTGACGTGTATGGCTCGAAGCACTC 283390 Query 65494 AGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTT 65553 || || |||||||| | || || ||||||||||| ||||| || | | |||||| Sbjct 283389 GTTGAAACCGAGAATTTGAGATGTGGAAGCAGTTGGCATAGGAGCAACAAGAAGTGAGTT 283330 Query 65554 TCGCAATCCGTTCATTTCAATGTTG----TGACGCAATTCGTCCCAGTTCCACATCGGTT 65609 || | |||| | | | || | ||| || | |||||||| ||| | | | Sbjct 283329 GCGAATACCGTGCTTCTTGATATCAGCCTTGA-GCGA---GTCCCAGTCCCAGA---GAT 283277 Query 65610 TATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGG----CCGGT 65665 ||| | | ||| |||||| || | || || | || |||| | || Sbjct 283276 C--CGTAGGAGTG-ACGTTCCACATGTCGTACTGGAGAATACC----CTGGGAAACTGGA 283224 Query 65666 GAACCGAGGAAACTATCGTACACTCCCTCCTCCTTG-GCAAGTTGACAGCTGGTC-TCGA 65723 || || | | | | ||| | ||| || |||| ||||| | ||| | || | Sbjct 283223 GAGCCCTCGTAGGTTTTGTATG-TGCCTTCTTCTTGTGCAAGCTTGCAGGAAGAGGTCAA 283165 Query 65724 GTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCT 65783 | |||||| |||||||||||||| || | ||||| | |||||| || Sbjct 283164 G-GCGGCATGGTAAATGGTCTCGAAGATTTGAATGTTAAGCTTCTTTGCCTCGGGAGACT 283106 Query 65784 CGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGG 65843 || | |||| | | | |||| || || ||||| || || |||| ||||| || Sbjct 283105 CGAAGGGCAGGCGAAGAGCAAGGAAAGCATCCGCAAGACCCTGTACACCAACACCGACGG 283046 Query 65844 GACGATGACGCAAATTGGAAC-GTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATA 65902 |||| ||||| | ||| || | || || || || ||||||| |||| || || Sbjct 283045 GACGGTGACGGGAGTTGCTGTTGTAT-GCTTCGGGAACGGGGTAGTGGTTGACGTCAATG 282987 Query 65903 ATGCGATTCAAATTGCGTGTCACCACATGCACGA-TACGTCGCAA-TTGTTCGAAATCAA 65960 || ||||| ||||| | || || |||| | ||| |||| ||||| ||||||| Sbjct 282986 ATCTTGTTCAAGTTGCGAATGACAGTTTGGACGACTTCGT-GCAACTTGTT-GAAATCAT 282929 Query 65961 AATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGA 66020 | |||| || | || | || | || |||| || | || | ||||| | Sbjct 282928 A--------GACGC-CGCGT-TGAACGTCAACG-AAGGTTGGCAAAGCCATG-GATGCCA 282881 Query 66021 GGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTAC 66080 |||||| ||||| | ||| ||||| || | ||||| | || || ||||||||||| Sbjct 282880 AGTTGCAAACAGCGACCTCATCAGGCGCAGAGTACTCAATGATCTCAGTGCACAGATTGG 282821 Query 66081 TGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACA 66140 || || ||||| ||||| |||| ||||| |||||||| ||||| ||||| ||||| | Sbjct 282820 AGCTACGAATGGTTCCCAAGTTCTTCTGATTGCTCTTGCGGTTGCAAGCATCTTTGTAAA 282761 Query 66141 TCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA------G 66194 |||| | || |||| ||||| |||| | || ||||||| ||| || | Sbjct 282760 GCATGAAAGGGTTGCCAGTCTCGGTCTGGGCTTGAAGAATGGCGTACCAGAGCTTTTGGG 282701 Query 66195 CGCG--TGCCTTCACCGT-ACGTACCGC-----CCTACCT---------------TTGCG 66231 |||| | ||||| | ||| | | | ||||| | ||| Sbjct 282700 CGCGGATAGTTTCACGGCCACGGCCTTCTTTCTCGTACCTGGGAGCGGTTAGTATTGGCG 282641 Query 66232 ------------TTCG--------TAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCAT 66271 |||| || | |||||||| |||||| ||||| | Sbjct 282640 GTAGTCAAGCACTTCGGGGCAACTTACTTCTCGTAGAGAGCTTCGAACTCGTCACCGTAG 282581 Query 66272 ACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCT 66331 | |||| |||| || |||| ||| || ||||| || | ||| || |||| |||||| Sbjct 282580 ATATCGGCAAGACCAGGGCACTCGTGAGGGCACATGAGAGTCCAGTCGCCATTCTGTTCG 282521 Query 66332 ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGC 66391 || || ||| || || || || ||||| | ||| ||||| ||||| || || || Sbjct 282520 ACGCGCTTCATGAACAGGTCGGGAATCCACAAGGCATAGAAAAGATCACGAGCACGCGCT 282461 Query 66392 TCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGT 66451 || || ||||||| || || | || || | | | |||| ||||| |||||||| Sbjct 282460 TCTTCTTTGCCGTGGTTCTTTCTCAGATCTAACCAGTTGAAGACATCGGCGTGCCATGGC 282401 Query 66452 TCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCG 66511 || |||||||||||||| | || ||| ||| ||||||||| || ||||||||||| Sbjct 282400 TCGAGGTAGATGGCGAATGCACCAGGACGCTTGTTGCCACCTTGATCAACGTAGCGAGCA 282341 Query 66512 ACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCG 66571 || |||||||| | ||| || || || ||||| ||| |||| || || || | Sbjct 282340 GTCGCGTCAAAGACACGGAGCATAGGAACAAGACCGTTCGATGTGCCGTTTGTTCCTCCA 282281 Query 66572 ATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTC 66631 ||| ||||| || || || || | || || || |||||||| || ||||| Sbjct 282280 ATGTATGATCCAGTGGCTCGGATGCGATGTATGTTAAGGCCGATACCACCAGCGGTCTTT 282221 Query 66632 GAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGA 66689 || || ||||||| || | |||| | | || || || || ||| |||| Sbjct 282220 GAAATCATAGCACAAGTCTTGAGGGTGTC--GTAGATACCCTCGATACTGTCCTCCTTCG 282163 Query 66690 TGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGG 66749 || | |||| |||| || ||||| |||| |||||| | || ||| || |||| Sbjct 282162 TGTCAATGAGGAAGCAAGACGAGAGTTGCGGTTGAGGTGTGCCTGCGTTGAAAAGTGTGG 282103 Query 66750 GTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAA 66809 | | |||||||| ||||| | | ||||||||| |||||||||| || ||| |||| Sbjct 282102 GGGAGGCGTGCGTGAAGTATTTGTTAGACATGTAGTTGTACGTCTGAATAGCAGATTCAA 282043 Query 66810 TGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCCGTT---CG 66865 ||| || || ||||| |||| || |||| ||||| | | | ||| || || | || Sbjct 282042 TGTCCTCTCCGTGAATGCCGACTGCCACA-CGCATGATCATATGTTGTGGACGCTCAGCG 281984 Query 66866 ACC-AGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 ||| |||| ||| || | | || ||| || || ||||||||||||| |||||||| Sbjct 281983 ACCTTGCCG---CTT-ATTCGGAGTAGGTATGATCGCTCCAGGGTCTTGAAGCCAAAGTA 281928 Query 66925 CGAGTAATTGAAATC 66939 |||||||||||| Sbjct 281927 TTGGTAATTGAAATC 281913 >seq110 Length=125662 Score = 98.7 bits (108), Expect = 8e-16 Identities = 289/437 (66%), Gaps = 9/437 (2%) Strand=Plus/Minus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 ||||| || | ||||||||| | || ||||| || | ||||| | ||||| ||| | Sbjct 62717 GCATTCGCAGCTGTCGAGGGTATCTTCTTCAGCGGCGCCTTTGCATCTATCTTCTGGCTC 62658 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| || || || |||||||| |||||||| ||| || | || || ||||||||| Sbjct 62657 AAGAAGCGCGGTCTCATGCCCGGCTTGACCTTCTCCAACGAACTTATCTCTCGCGACGAG 62598 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAAC-GCT-ATCTGGTGAATCGTCCGT 61675 || ||||| || ||||| | || ||| || ||| | | ||| | | || Sbjct 62597 GGAATGCACACCGACTTTGCCTGCCTCCTCTTCTCACAGCTCAAC--AAGAAGCCTTCGC 62540 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 | || ||| || | | || | ||||| ||| || || |||||||| ||| Sbjct 62539 CTGA--AGC-CGTCCGCGCCATCATCACCGAGGCAGTACAAATTGAGCAGGAATTCTTGA 62483 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 || || || || | | | |||||||||| | | || |||| ||||| || | Sbjct 62482 GCGAAGCATTACCGTGCAGATTGCTCGGCATGAACTCTACCCTCATGTGCCAGTACATCG 62423 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCG-ATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 | |||||||| || ||||| ||| | | |||| ||| || | || || | Sbjct 62422 AGTTTGTTGCTGATCGTCTCTTGCTTGCGCTTGGCAATGTCAAGG-TTTACAACGCCGTC 62364 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 ||||| || || |||||||| | || || || | || ||||| || ||||||||||| Sbjct 62363 AACCCCTTCGACTTCATGGAGAACATATCTCTTGCCGGAAAGACTAACTTTTTCGAGAAG 62304 Query 61915 CGTGTAGGCGACTATCA 61931 || || || || || || Sbjct 62303 CGCGTCGGTGATTACCA 62287 Score = 95.1 bits (104), Expect = 1e-14 Identities = 222/332 (67%), Gaps = 5/332 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||||||||||||| ||||| || || || ||||| | || ||| ||||| | Sbjct 63183 ATCTGGCGCATGTACAAGAAGGCAATGGCCTCATTTTGGACCGCCGAAGAGATCGATCTC 63124 Query 61147 TCCAAAGACATGAATGACTGG---GAGCG-TTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||||||| | |||||| | || | | ||| || |||| |||||| Sbjct 63123 TCCAAAGACGTTCCAGACTGGAACAACCGCCTGAACGA-CGACGAACGCTTTTTCATCTC 63065 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||| | | || || || || || ||||| || |||||||| ||||| | | ||||| Sbjct 63064 ACACATTCTCGCATTTTTCGCAGCATCGGATGGCATCGTCAACGAGAACCTCCTCGAACG 63005 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| | || || || || | || || || || || ||||| || || || ||||| Sbjct 63004 TTTTAGCAACGAAGTTCAGGTTCCAGAAGCCCGATGCTTTTACGGTTTTCAAATCGCCAT 62945 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 ||| || |||| || |||| ||| | || ||||| |||| ||||| |||| Sbjct 62944 GGAAAACATCCATTCCGAGACATACTCCCTCCTGATCGAGACGTTGATCAGCGAGCCCAA 62885 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGA 61414 | |||| | | |||||||| ||||||| Sbjct 62884 GCAACGCACATACCTTTTCAATGCTATCGAGA 62853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397562960825600