Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31]
1,680 sequences; 40,142,277 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq2 518 6e-145
seq1546 136 7e-30
>seq2
Length=2909
Score = 518 bits (574), Expect = 6e-145
Identities = 292/295 (99%), Gaps = 0/295 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 632 TACTAAGCGGAATTACCGTTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 691
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 692 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 751
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 752 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 811
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 812 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 871
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 872 CAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 926
>seq1546
Length=78195
Score = 136 bits (150), Expect = 7e-30
Identities = 100/115 (87%), Gaps = 1/115 (1%)
Strand=Plus/Plus
Query 104 AATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCA 163
||||||| |||| |||| |||| |||| ||||||||||||||||| | ||||||||| ||
Sbjct 15580 AATCCAAAGCTTGCCGACTTCTACTTCAGTATGATAGGAAGAGCCAAAATCGAAGGAACA 15639
Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCA-GTTATCCCTGTGGT 217
||||||||||||||||||||| ||||||||||| |||||| | |||| | ||||
Sbjct 15640 AAAAGCAACGTCGCTATGAACACTTGGCTGCCATAAGCCACATAATCCTTCTGGT 15694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854385646080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |