Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31]
1,680 sequences; 40,142,277 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq2 327 2e-87
>seq2
Length=2909
Score = 327 bits (362), Expect = 2e-87
Identities = 244/280 (87%), Gaps = 7/280 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 634 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 577
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 576 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCG 517
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||||||||||| | ||| |||| | ||| ||||||||||||||||||||| ||
Sbjct 516 GAACGGGGTGATTTACCCCTACACACTTCACTCGTGTACGAATAGGCTTCGGCCCCGGAC 457
Query 181 CTTAGCAGGCCGGCAAC-GGGCGTCCCGCGGAAGCGCGGGGC-GCTCAGCTGGCGGATTG 238
|| ||||||||| | || ||| | ||| || || |||| | | ||| ||||| ||||
Sbjct 456 CTCAGCAGGCCGACGACGGGGTGGCCCCCGAAA---CGGGCCTCCCCAGTTGGCGCATTG 400
Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||||||||| |||| ||||||||||||||||||||||||
Sbjct 399 CAATTTCACCGTGCGTAGGGATAAATCCTTTGCAGACGAC 360
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819186667520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |