Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq2 327 2e-87 >seq2 Length=2909 Score = 327 bits (362), Expect = 2e-87 Identities = 244/280 (87%), Gaps = 7/280 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||| Sbjct 634 GTACGAGAGGAACCGCGGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 577 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 576 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCG 517 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||||||||||| | ||| |||| | ||| ||||||||||||||||||||| || Sbjct 516 GAACGGGGTGATTTACCCCTACACACTTCACTCGTGTACGAATAGGCTTCGGCCCCGGAC 457 Query 181 CTTAGCAGGCCGGCAAC-GGGCGTCCCGCGGAAGCGCGGGGC-GCTCAGCTGGCGGATTG 238 || ||||||||| | || ||| | ||| || || |||| | | ||| ||||| |||| Sbjct 456 CTCAGCAGGCCGACGACGGGGTGGCCCCCGAAA---CGGGCCTCCCCAGTTGGCGCATTG 400 Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||||||| |||| |||||||||||||||||||||||| Sbjct 399 CAATTTCACCGTGCGTAGGGATAAATCCTTTGCAGACGAC 360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819186667520