Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1548 834 0.0 seq1566 91.5 4e-16 >seq1548 Length=2731 Score = 834 bits (924), Expect = 0.0 Identities = 488/504 (97%), Gaps = 1/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 299 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 358 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 359 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 418 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct 419 TCTCAGGCTCCCTCTCCGGAGTCGAACCCTAATTCCCCGTTACCCGTTGAAACCATTGTA 478 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 | |||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 479 GACCACTACTCTACAATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 538 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||||||||||||||||||||||||||||||| ||| | ||||||||||||| ||||| Sbjct 539 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCGCCAGGAAGCCCCGAAGGGCATTGGT 598 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 599 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTCGCATGTATTAGCTCTAG 658 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 659 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 718 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 719 GCCATTCGCAGTTTCACAGTATAG-TTGCTTATACTTAGACATGCATGGCTTAATCTTTG 777 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 778 AGACAAGCATATGACTACTGGCAG 801 >seq1566 Length=3207 Score = 91.5 bits (100), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 428 GCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAG 487 ||| ||||| |||||| || |||||||||||| |||||||||||||||||||||||||| Sbjct 484 GCAATTTCATAGTATAG-TTACTTATACTTAGATATGCATGGCTTAATCTTTGAGACAAG 542 Query 488 CATATGACTACT 499 |||| |||||| Sbjct 543 TATATAACTACT 554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510374625280