Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31]
1,413 sequences; 60,939,407 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq583 210 9e-52
seq780 201 5e-49
seq835 197 6e-48
seq959 192 2e-46
seq655 188 3e-45
seq505 152 2e-34
>seq583
Length=92016
Score = 210 bits (232), Expect = 9e-52
Identities = 146/165 (88%), Gaps = 3/165 (2%)
Strand=Plus/Minus
Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 72398 TCGACCGATCCTAATGTCTTCGGAAGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 72339
Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637
|||||||||||||| | | |||||||| |||| |||||||||||| || |||||||| ||
Sbjct 72338 AGATGGTGAACTATACGTAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTCGTAG 72279
Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679
||||||| |||| ||||||||||| | |||||| |||||||
Sbjct 72278 CGGTTCTAACGTGTAAATCGATCGTTAAATAATTTGTATATAGGG 72234
>seq780
Length=33944
Score = 201 bits (222), Expect = 5e-49
Identities = 144/165 (87%), Gaps = 3/165 (2%)
Strand=Plus/Minus
Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577
|||||||||||| || |||||||| ||||||||||||||| |||||| || ||||||||
Sbjct 6163 TCGACCGATCCTAATATCTTCGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAA 6104
Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637
||||||| |||||||| |||| |||||||||| |||||||||||| || |||||||| ||
Sbjct 6103 AGATGGTAAACTATGCGTGAACAGGGTGAAGCTAGAGGAAACTCTAGTAGAGGCTCGTAG 6044
Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679
||||||| |||||||||||||||| | |||||| ||||||||
Sbjct 6043 CGGTTCTAACGTGCAAATCGATCGTTAAATAATTTGCGTATAGGG 5999
Score = 188 bits (208), Expect = 3e-45
Identities = 140/163 (86%), Gaps = 3/163 (2%)
Strand=Plus/Minus
Query 520 GACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAG 579
|||||||||| ||||||||||| ||||||||||||||| |||||| ||| ||||||||||
Sbjct 13929 GACCGATCCTAATGTCTTCGGAAGGATTTGAGTAAGAGTATAGCTATTGAGACCCGAAAG 13870
Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCG 639
|| || |||||| | |||| |||||||||| |||||||||||| || |||||||| || |
Sbjct 13869 ATAGTAAACTATACGTGAACAGGGTGAAGCTAGAGGAAACTCTAGTAGAGGCTCGTAGTG 13810
Query 640 GTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679
||||| ||||||||||||| || | |||||| ||||||||
Sbjct 13809 GTTCTAACGTGCAAATCGATTGTTAAATAATTTGCGTATAGGG 13767
>seq835
Length=29022
Score = 197 bits (218), Expect = 6e-48
Identities = 143/165 (87%), Gaps = 3/165 (2%)
Strand=Plus/Minus
Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577
|||||||||||| ||||||||||| ||||||||||||||| |||||| || ||||||||
Sbjct 9832 TCGACCGATCCTAATGTCTTCGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAA 9773
Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637
|||| || |||||| | |||||||||| |||| |||||||||||| || |||||||| ||
Sbjct 9772 AGATAGTAAACTATACGTGAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTCGTAG 9713
Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679
||||||| |||||||||||||||| | |||||| ||||||||
Sbjct 9712 CGGTTCTAACGTGCAAATCGATCGTTAAATAATTTGCGTATAGGG 9668
>seq959
Length=208632
Score = 192 bits (212), Expect = 2e-46
Identities = 142/165 (86%), Gaps = 3/165 (2%)
Strand=Plus/Minus
Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577
|||||||||||| || |||||||| ||||||||||||||| |||||| ||| ||||||||
Sbjct 138644 TCGACCGATCCTAATATCTTCGGAAGGATTTGAGTAAGAGTATAGCTATTGAGACCCGAA 138585
Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637
|||| ||||||||| | | |||||||| |||| |||||||||||| || |||||||| ||
Sbjct 138584 AGATAGTGAACTATACGTAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTCGTAG 138525
Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679
||||||| |||||||||||||||| | ||||| ||||||||
Sbjct 138524 CGGTTCTAACGTGCAAATCGATCGTTAAATAATTTACGTATAGGG 138480
>seq655
Length=54554
Score = 188 bits (208), Expect = 3e-45
Identities = 141/165 (85%), Gaps = 3/165 (2%)
Strand=Plus/Minus
Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577
|||||||||||| || |||| ||| ||||||||||||||| |||||| ||| ||||||||
Sbjct 35040 TCGACCGATCCTAATATCTTTGGAAGGATTTGAGTAAGAGTATAGCTATTGAGACCCGAA 34981
Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637
|||| || |||||| | ||||||||||||||| |||||||||||| || |||||| | ||
Sbjct 34980 AGATAGTAAACTATACGTGAATAGGGTGAAGCTAGAGGAAACTCTAGTAGAGGCTTGTAG 34921
Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679
||||||| ||| |||||||||||| | |||||| ||||||||
Sbjct 34920 CGGTTCTAACGTACAAATCGATCGTTAAATAATTTGCGTATAGGG 34876
>seq505
Length=113627
Score = 152 bits (168), Expect = 2e-34
Identities = 133/165 (81%), Gaps = 3/165 (2%)
Strand=Plus/Minus
Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577
|| ||||||||| || |||||||| ||||||||||||||| |||||| || ||||||||
Sbjct 110670 TCAACCGATCCTAATATCTTCGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAA 110611
Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637
|||| || |||||| | |||||||| |||| |||||||||||| || |||||| ||
Sbjct 110610 AGATAGTAAACTATATATAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTTATAG 110551
Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679
||||| ||| |||||||||||| | ||||| ||||||||
Sbjct 110550 TAGTTCTAACGTACAAATCGATCGTTAAATAATTTACGTATAGGG 110506
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079969691150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |