Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq583 210 9e-52 seq780 201 5e-49 seq835 197 6e-48 seq959 192 2e-46 seq655 188 3e-45 seq505 152 2e-34 >seq583 Length=92016 Score = 210 bits (232), Expect = 9e-52 Identities = 146/165 (88%), Gaps = 3/165 (2%) Strand=Plus/Minus Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 72398 TCGACCGATCCTAATGTCTTCGGAAGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 72339 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||||||||||||| | | |||||||| |||| |||||||||||| || |||||||| || Sbjct 72338 AGATGGTGAACTATACGTAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTCGTAG 72279 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679 ||||||| |||| ||||||||||| | |||||| ||||||| Sbjct 72278 CGGTTCTAACGTGTAAATCGATCGTTAAATAATTTGTATATAGGG 72234 >seq780 Length=33944 Score = 201 bits (222), Expect = 5e-49 Identities = 144/165 (87%), Gaps = 3/165 (2%) Strand=Plus/Minus Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 |||||||||||| || |||||||| ||||||||||||||| |||||| || |||||||| Sbjct 6163 TCGACCGATCCTAATATCTTCGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAA 6104 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 ||||||| |||||||| |||| |||||||||| |||||||||||| || |||||||| || Sbjct 6103 AGATGGTAAACTATGCGTGAACAGGGTGAAGCTAGAGGAAACTCTAGTAGAGGCTCGTAG 6044 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679 ||||||| |||||||||||||||| | |||||| |||||||| Sbjct 6043 CGGTTCTAACGTGCAAATCGATCGTTAAATAATTTGCGTATAGGG 5999 Score = 188 bits (208), Expect = 3e-45 Identities = 140/163 (86%), Gaps = 3/163 (2%) Strand=Plus/Minus Query 520 GACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAG 579 |||||||||| ||||||||||| ||||||||||||||| |||||| ||| |||||||||| Sbjct 13929 GACCGATCCTAATGTCTTCGGAAGGATTTGAGTAAGAGTATAGCTATTGAGACCCGAAAG 13870 Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCG 639 || || |||||| | |||| |||||||||| |||||||||||| || |||||||| || | Sbjct 13869 ATAGTAAACTATACGTGAACAGGGTGAAGCTAGAGGAAACTCTAGTAGAGGCTCGTAGTG 13810 Query 640 GTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679 ||||| ||||||||||||| || | |||||| |||||||| Sbjct 13809 GTTCTAACGTGCAAATCGATTGTTAAATAATTTGCGTATAGGG 13767 >seq835 Length=29022 Score = 197 bits (218), Expect = 6e-48 Identities = 143/165 (87%), Gaps = 3/165 (2%) Strand=Plus/Minus Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 |||||||||||| ||||||||||| ||||||||||||||| |||||| || |||||||| Sbjct 9832 TCGACCGATCCTAATGTCTTCGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAA 9773 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||| || |||||| | |||||||||| |||| |||||||||||| || |||||||| || Sbjct 9772 AGATAGTAAACTATACGTGAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTCGTAG 9713 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679 ||||||| |||||||||||||||| | |||||| |||||||| Sbjct 9712 CGGTTCTAACGTGCAAATCGATCGTTAAATAATTTGCGTATAGGG 9668 >seq959 Length=208632 Score = 192 bits (212), Expect = 2e-46 Identities = 142/165 (86%), Gaps = 3/165 (2%) Strand=Plus/Minus Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 |||||||||||| || |||||||| ||||||||||||||| |||||| ||| |||||||| Sbjct 138644 TCGACCGATCCTAATATCTTCGGAAGGATTTGAGTAAGAGTATAGCTATTGAGACCCGAA 138585 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||| ||||||||| | | |||||||| |||| |||||||||||| || |||||||| || Sbjct 138584 AGATAGTGAACTATACGTAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTCGTAG 138525 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679 ||||||| |||||||||||||||| | ||||| |||||||| Sbjct 138524 CGGTTCTAACGTGCAAATCGATCGTTAAATAATTTACGTATAGGG 138480 >seq655 Length=54554 Score = 188 bits (208), Expect = 3e-45 Identities = 141/165 (85%), Gaps = 3/165 (2%) Strand=Plus/Minus Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 |||||||||||| || |||| ||| ||||||||||||||| |||||| ||| |||||||| Sbjct 35040 TCGACCGATCCTAATATCTTTGGAAGGATTTGAGTAAGAGTATAGCTATTGAGACCCGAA 34981 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||| || |||||| | ||||||||||||||| |||||||||||| || |||||| | || Sbjct 34980 AGATAGTAAACTATACGTGAATAGGGTGAAGCTAGAGGAAACTCTAGTAGAGGCTTGTAG 34921 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679 ||||||| ||| |||||||||||| | |||||| |||||||| Sbjct 34920 CGGTTCTAACGTACAAATCGATCGTTAAATAATTTGCGTATAGGG 34876 >seq505 Length=113627 Score = 152 bits (168), Expect = 2e-34 Identities = 133/165 (81%), Gaps = 3/165 (2%) Strand=Plus/Minus Query 518 TCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 || ||||||||| || |||||||| ||||||||||||||| |||||| || |||||||| Sbjct 110670 TCAACCGATCCTAATATCTTCGGAAGGATTTGAGTAAGAGTATAGCTATTAAGACCCGAA 110611 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||| || |||||| | |||||||| |||| |||||||||||| || |||||| || Sbjct 110610 AGATAGTAAACTATATATAAATAGGGTAAAGCTAGAGGAAACTCTAGTAGAGGCTTATAG 110551 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCA---AATTTGGGTATAGGG 679 ||||| ||| |||||||||||| | ||||| |||||||| Sbjct 110550 TAGTTCTAACGTACAAATCGATCGTTAAATAATTTACGTATAGGG 110506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079969691150