Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31]
1,413 sequences; 60,939,407 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq693 136 7e-30
seq687 113 8e-23
>seq693
Length=248618
Score = 136 bits (150), Expect = 7e-30
Identities = 100/115 (87%), Gaps = 1/115 (1%)
Strand=Plus/Plus
Query 104 AATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCA 163
||||||| |||| |||| |||| |||| ||||||||||||||||| | ||||||||| ||
Sbjct 74051 AATCCAAAGCTTGCCGACTTCTACTTCAGTATGATAGGAAGAGCCAAAATCGAAGGAACA 74110
Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCA-GTTATCCCTGTGGT 217
||||||||||||||||||||| ||||||||||| |||||| | |||| | ||||
Sbjct 74111 AAAAGCAACGTCGCTATGAACACTTGGCTGCCATAAGCCACATAATCCTTCTGGT 74165
>seq687
Length=47348
Score = 113 bits (124), Expect = 8e-23
Identities = 80/92 (87%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||||| ||||||| ||| |||||||||| || ||||| |||||||||| || ||| |
Sbjct 355 TACTAAGTAGAATTACTATTAGGGCGACGGTTATTAGTAGAGTAAAACTAATCTATCTTA 296
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
| |||||||||||| |||||||||||||||||
Sbjct 295 TAACGGTCTAAACCTAGCTCACGTTCCCTATT 264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854387927328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |