Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq687 223 6e-56 >seq687 Length=47348 Score = 223 bits (246), Expect = 6e-56 Identities = 221/280 (79%), Gaps = 7/280 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||||||| || ||| ||||| |||||| ||||| || ||| ||| ||| Sbjct 353 GTACGAGAGGAACCGCGGATTT-AGA-TAATTAGTTTTTACGGCTATCCGACTAGGTAGT 410 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||| |||| || |||||| ||| ||||||||||||| |||||| || || Sbjct 411 ACCGCGAAGCTACTATCTACTAGATTATAGCTAAACGCCTCTAAGTTAGAATCTATACCG 470 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||||||| ||| | ||| | | || | | |||||||||||||||||||||| || Sbjct 471 GAACGGGGTAATTTACCCCTATATACTTTACTTGTATACGAATAGGCTTCGGCCCCGGAC 530 Query 181 CTTAGCAGGCCGGCAAC-GGGCGTCCCGCGGAAGCGCGGGGCGCTC-AGCTGGCGGATTG 238 || ||||||||| | || ||| | ||| || || |||| | | | || | ||| ||| Sbjct 531 CTCAGCAGGCCGACGACGGGGTGGCCCCCGAAA---CGGGCCCCCCTAGTTAGCGTATTA 587 Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| ||| | || ||||||||||||||| ||||||| Sbjct 588 TAATTTTACCGTACGTAGGGATAAATCCTTTATAGACGAC 627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819188786432