Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31]
1,413 sequences; 60,939,407 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq687 223 6e-56
>seq687
Length=47348
Score = 223 bits (246), Expect = 6e-56
Identities = 221/280 (79%), Gaps = 7/280 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||||||| || ||| ||||| |||||| ||||| || ||| ||| |||
Sbjct 353 GTACGAGAGGAACCGCGGATTT-AGA-TAATTAGTTTTTACGGCTATCCGACTAGGTAGT 410
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||| |||| || |||||| ||| ||||||||||||| |||||| || ||
Sbjct 411 ACCGCGAAGCTACTATCTACTAGATTATAGCTAAACGCCTCTAAGTTAGAATCTATACCG 470
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||||||| ||| | ||| | | || | | |||||||||||||||||||||| ||
Sbjct 471 GAACGGGGTAATTTACCCCTATATACTTTACTTGTATACGAATAGGCTTCGGCCCCGGAC 530
Query 181 CTTAGCAGGCCGGCAAC-GGGCGTCCCGCGGAAGCGCGGGGCGCTC-AGCTGGCGGATTG 238
|| ||||||||| | || ||| | ||| || || |||| | | | || | ||| |||
Sbjct 531 CTCAGCAGGCCGACGACGGGGTGGCCCCCGAAA---CGGGCCCCCCTAGTTAGCGTATTA 587
Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| ||| | || ||||||||||||||| |||||||
Sbjct 588 TAATTTTACCGTACGTAGGGATAAATCCTTTATAGACGAC 627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819188786432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |