Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq782 239 4e-58 seq549 98.7 8e-16 >seq782 Length=233898 Score = 239 bits (264), Expect = 4e-58 Identities = 482/705 (68%), Gaps = 14/705 (2%) Strand=Plus/Minus Query 66242 TCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGA 66301 |||||||| |||||| ||||| | | |||| |||| || |||| ||| || Sbjct 99947 TCGTAGAGAGCTTCGAACTCGTCACCGTAGATATCGGCAAGACCAGGGCACTCGTGAGGG 99888 Query 66302 CACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAG 66361 ||||| || | ||| || |||| |||||| || || ||| || || || || ||||| Sbjct 99887 CACATGAGAGTCCAGTCGCCATTCTGTTCGACGCGCTTCATGAACAGGTCGGGAATCCAC 99828 Query 66362 AGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCG 66421 | ||| ||||| ||||| || || || || || ||||||| || || | || || Sbjct 99827 AAGGCATAGAAAAGATCACGAGCACGCGCTTCTTCTTTGCCGTGGTTCTTTCTCAGATCT 99768 Query 66422 AGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGT 66481 | | | |||| ||||| |||||||| || |||||||||||||| | || ||| Sbjct 99767 AACCAGTTGAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAATGCACCAGGACGC 99708 Query 66482 TTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACG 66541 ||| ||||||||| || ||||||||||| || |||||||| | ||| || || Sbjct 99707 TTGTTGCCACCTTGATCAACGTAGCGAGCAGTCGCGTCAAAGACACGGAGCATAGGAACA 99648 Query 66542 AGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGA 66601 || ||||| ||| |||| || || || | ||| ||||| || || || || Sbjct 99647 AGACCGTTCGATGTGCCGTTTGTTCCTCCAATGTATGATCCAGTGGCTCGGATGCGATGT 99588 Query 66602 ACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCC 66659 | || || || |||||||| || ||||| || || ||||||| || | |||| Sbjct 99587 ATGTTAAGGCCGATACCACCAGCGGTCTTTGAAATCATAGCACAAGTCTTGAGGGTGTC- 99529 Query 66660 GGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGG 66719 | | || || || ||| ||| |||| || | |||| |||| || ||||| | Sbjct 99528 -GTAGATACCCTCGATGCTGTCCTCCTTCGTGTCAATGAGGAAGCAAGACGAGAGTTGCG 99470 Query 66720 GTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACA 66779 ||| |||||| | || ||| || || || | |||||||| ||||| | | ||||| Sbjct 99469 GTTGAGGTGTGCCTGCGTTGAAAAGTGTAGGGGAGGCGTGCGTGAAGTATTTGTTAGACA 99410 Query 66780 TGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACAT 66838 |||| ||||| |||| ||| ||| ||||||| || || ||||| |||| || |||| Sbjct 99409 TGTAGTTGTATGTCTGTATGGCAGATTCAATGTCCTCTCCGTGAATGCCGACTGCCACA- 99351 Query 66839 CGCATCAGGAGGTATTGAGGCCGTT---CGACC-AGCCGATCCTTGATATGCATTAAGTA 66894 ||||| | | | ||| || || | ||||| |||| ||| || | | || ||| Sbjct 99350 CGCATGATCATATGTTGTGGACGCTCAGCGACCTTGCCG---CTT-ATTCGGAGTAGGTA 99295 Query 66895 GGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 || || ||||| ||||||| |||||||| |||||||||||| Sbjct 99294 TGATCGCTCCAGAGTCTTGAAGCCAAAGTATTGGTAATTGAAATC 99250 Score = 158 bits (174), Expect = 1e-33 Identities = 732/1132 (65%), Gaps = 50/1132 (4%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||||||||| | | ||| ||| |||| | || |||||||| || || Sbjct 101142 ATCGACAGTGAACTGGATGGGTGCTGAAGCAGCCATGGTTCGGAGGTAGTACATTCCAGT 101083 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 |||||| || |||| || || ||||| || | |||| |||| | |||||| Sbjct 101082 CTTGAGACCCATCTTCCAACCAGCAAAGTGCATGGAAG-TAATCTTGCCCATGGTCGGCT 101024 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || ||||| |||| ||||| ||| | |||||||| ||||||| Sbjct 101023 CTTTCATGTGAATGTTCAAGCTCTGAGATTGATCAATGAAGGCGCCACGATCCGCAGCCA 100964 Query 65256 TGTCAATGATACGACGTCCCGAT-ATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313 || || || ||| | | | || ||||| || |||||||| ||| | | | | || Sbjct 100963 TGGTGATAATGGTACG-CTGGCTGATTTCCCAAACCGTCTTGTAAAGG-GCCTTGATATC 100906 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 | ||||| | ||||| ||||| ||||||| |||||| || ||||| ||| Sbjct 100905 ATCGGGAATATTAGGAATGTTCTGGATAGAACCACCCTCTGCAATGATACGATTCTTCAT 100846 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTG 65433 || ||||| | ||||| |||| |||| || | || | |||| |||||| Sbjct 100845 GTTGTCCGACCAAAGACCCATCTCGACGAGATCTTTGAGCAGCCATGGGTTGACGACTTG 100786 Query 65434 GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTC 65493 ||| || || | || |||||||| ||||| || |||||| || || ||| | || Sbjct 100785 GAATTCCCCAGCAAGCACACGACGAGAGTAGATATTTGACGTGTATGGCTCGAAGCACTC 100726 Query 65494 AGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTT 65553 || || |||||||| | || || ||||||||||| ||||| || | | |||||| Sbjct 100725 GTTGAAACCGAGAATTTGAGATGTGGAAGCAGTTGGCATAGGAGCAACAAGAAGTGAGTT 100666 Query 65554 TCGCAATCCGTTCATTTCAAT----GTTGTGACGCAATTCGTCCCAGTTCCACATCGGTT 65609 || | |||| | | | || | ||| || | |||||||| ||| | | | Sbjct 100665 GCGAATACCGTGCTTCTTGATATCAGCCTTGA-GCGA---GTCCCAGTCCCAGA--GAT- 100613 Query 65610 TATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGG----CCGGT 65665 ||| | | ||| |||||| || | || || | || |||| | || Sbjct 100612 --CCGTAG-GAGTGACGTTCCACATGTCGTACTGGAGAATACC----CTGGGAAACTGGA 100560 Query 65666 GAACCGAGGAAACTATCGTACACTCCCTCCTCCTTG-GCAAG-TTGACAGCTGGTCTCGA 65723 || || | | | | ||| | ||| || |||| ||||| ||| | | || | Sbjct 100559 GAGCCCTCGTAGGTTTTGTA-TGTGCCTTCTTCTTGTGCAAGCTTGCAGGAAGAGGTCAA 100501 Query 65724 GTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCT 65783 | |||||| |||||||||||||| || | || || | |||||| || Sbjct 100500 G-GCGGCATGGTAAATGGTCTCGAAGATTTGAATGTTGAGCTTCTTTGCCTCGGGAGACT 100442 Query 65784 CGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGG 65843 || | |||| | | | |||| || || ||||| || || |||| ||||| || Sbjct 100441 CGAAGGGCAGGCGAAGAGCAAGGAAAGCATCAGCAAGACCCTGTACACCAACACCGACGG 100382 Query 65844 GACGATGACGCAAATTG-GAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATA 65902 |||| ||||| | ||| || | || || || || || |||| |||| || || Sbjct 100381 GACGGTGACGGGAGTTGCTGTTGTAT-GCTTCGGGAACGGGATAGTGGTTGACGTCAATG 100323 Query 65903 ATGCGATTCAAATTGCGTGTCACCACATGCACGA-TACGTCGCAA-TTGTTCGAAATCAA 65960 || ||||| ||||| | || || |||| | ||| |||| ||||| ||||||| Sbjct 100322 ATCTTGTTCAAGTTGCGAATGACAGTCTGGACGACTTCGT-GCAACTTGTT-GAAATCAT 100265 Query 65961 AATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGA 66020 | |||| | | || | || | || |||| || | || | ||||| | Sbjct 100264 A--------GACG--CCGCGTTGAACGTCAAC-GAAGGTTGGCAAAGCCATG-GATGCCA 100217 Query 66021 GGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTAC 66080 |||||| ||||| | ||| ||||| || | ||||| | || || ||||||||||| Sbjct 100216 AGTTGCAAACAGCAACCTCATCAGGCGCAGAGTACTCAATGATCTCAGTGCACAGATTGG 100157 Query 66081 TGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACA 66140 || ||| ||||| ||||| |||| ||||| |||||||| ||||| ||||| ||||| | Sbjct 100156 AGCTGCGAATGGTTCCCAAGTTCTTCTGATTGCTCTTGCGGTTGCAAGCATCTTTGTAAA 100097 Query 66141 TCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAG 66192 |||| | || |||| ||||| |||| | || ||||||| ||| || Sbjct 100096 GCATGAAAGGGTTGCCAGTCTCGGTCTGGGCTTGAAGAATGGCGTACCAGAG 100045 >seq549 Length=285283 Score = 98.7 bits (108), Expect = 8e-16 Identities = 289/437 (66%), Gaps = 9/437 (2%) Strand=Plus/Minus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 ||||| || | ||||||||| | || ||||| || | ||||| | ||||| ||| | Sbjct 207133 GCATTCGCAGCTGTCGAGGGTATCTTCTTCAGCGGCGCCTTTGCATCTATCTTCTGGCTC 207074 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| || || || |||||||| |||||||| ||| || | || || ||||||||| Sbjct 207073 AAGAAGCGCGGTCTCATGCCCGGCTTGACCTTCTCCAACGAACTTATCTCTCGCGACGAG 207014 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAAC-GCT-ATCTGGTGAATCGTCCGT 61675 || ||||| || ||||| | || ||| || ||| | | ||| | | || Sbjct 207013 GGAATGCACACCGACTTTGCCTGCCTCCTCTTCTCACAGCTCAAC--AAGAAGCCTTCGC 206956 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 | || ||| || | | || | ||||| ||| || || |||||||| ||| Sbjct 206955 CTGA--AGC-CGTCCGCGCCATCATCACCGAGGCAGTACAAATTGAGCAGGAATTCTTGA 206899 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 || || || || | | | |||||||||| | | || |||| ||||| || | Sbjct 206898 GCGAAGCATTACCGTGCAGATTGCTCGGCATGAACTCTACCCTCATGTGCCAGTACATCG 206839 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCG-ATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 | |||||||| || ||||| ||| | | |||| ||| || | || || | Sbjct 206838 AGTTTGTTGCTGATCGTCTCTTGCTTGCGCTTGGCAATGTCAAGG-TTTACAACGCCGTC 206780 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 ||||| || || |||||||| | || || || | || ||||| || ||||||||||| Sbjct 206779 AACCCCTTCGACTTCATGGAGAACATATCTCTTGCCGGAAAGACTAACTTTTTCGAGAAG 206720 Query 61915 CGTGTAGGCGACTATCA 61931 || || || || || || Sbjct 206719 CGCGTCGGTGATTACCA 206703 Score = 95.1 bits (104), Expect = 1e-14 Identities = 222/332 (67%), Gaps = 5/332 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||||||||||||| ||||| || || || ||||| | || ||| ||||| | Sbjct 207599 ATCTGGCGCATGTACAAGAAGGCAATGGCCTCATTTTGGACCGCCGAAGAGATCGATCTC 207540 Query 61147 TCCAAAGACATGAATGACTGG---GAGCG-TTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||||||| | |||||| | || | | ||| || |||| |||||| Sbjct 207539 TCCAAAGACGTTCCAGACTGGAACAACCGCCTGAACGA-CGACGAACGCTTTTTCATCTC 207481 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||| | | || || || || || ||||| || |||||||| ||||| | | ||||| Sbjct 207480 ACACATTCTCGCATTTTTCGCAGCATCGGATGGCATCGTCAACGAGAACCTCCTCGAACG 207421 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| | || || || || | || || || || || ||||| || || || ||||| Sbjct 207420 TTTTAGCAACGAAGTTCAGGTTCCAGAAGCCCGATGCTTTTACGGTTTTCAAATCGCCAT 207361 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 ||| || |||| || |||| ||| | || ||||| |||| ||||| |||| Sbjct 207360 GGAAAACATCCATTCCGAGACATACTCCCTCCTGATCGAGACGTTGATCAGCGAGCCCAA 207301 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGA 61414 | |||| | | |||||||| ||||||| Sbjct 207300 GCAACGCACATACCTTTTCAATGCTATCGAGA 207269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397561153506320