Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23] 367 sequences; 31,780,469 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq85 262 6e-68 >seq85 Length=45499 Score = 262 bits (290), Expect = 6e-68 Identities = 231/280 (83%), Gaps = 6/280 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||| | Sbjct 14 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCATT 71 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 72 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCG 131 Query 121 GAACGGGGTGATTCTCTCCTGCACATCG-TAGTCGGATACGAATAGGCTTCGGCCCCGAA 179 ||| ||| |||||| || || || ||| || ||||||||||||||||||||| | Sbjct 132 GAAAGGGACGATTCTGCCCCGCGTCGCGATAGACGAGTACGAATAGGCTTCGGCCCCGGA 191 Query 180 CCTTAGCAGGCCGGCAACGGG-CGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTG 238 ||| |||||| |||| ||||| || ||| ||||| | ||| || ||| |||| |||| Sbjct 192 CCTCAGCAGGTCGGCGACGGGTCGCTCCG-GGAAGAG-GGGCGGCCTAGCCGGCGTATTG 249 Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||| | ||| |||||||| ||||||||||||| Sbjct 250 CAAGATGGTTGCGCGTGGGGATAAACACTTTGCAGACGAC 289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819197087488