Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq10 311 7e-80
seq15 163 2e-35
seq8 82.4 6e-11
>seq10
Length=848763
Score = 311 bits (344), Expect = 7e-80
Identities = 1225/1895 (65%), Gaps = 84/1895 (4%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| ||||||||||| | | || || |||| || | |||||||||||||| |||
Sbjct 459616 TCGACGGTGAACTGGATGGGAGCAGAGGCAGCCTGTGTACGCAGATAGTACATGCCAGTC 459675
Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGC--ATAATTCGGC 65194
||||| || ||| ||| || ||||||||| || | | || |||| || || ||
Sbjct 459676 TTGAGACCGAGCTT-CCAGCCAGCGAAATGCATGGAGG-TGATCTTGCCCATCGTT-GGT 459732
Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGA-CCACGATCTGCAGC 65253
|| || || || || | ||||| || || ||| |||| |||||||| || ||
Sbjct 459733 TCCTTCATGTGGATGTTGAGAGACTGGGATTGGTCAATG-AACGCGCCACGATCGGCGGC 459791
Query 65254 CATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTC 65313
||| | |||| | | ||| ||| |||||||| |||||||||| | ||
Sbjct 459792 CATCTGGATGACATGGCGTTGGCTTATTTCCCAGACCGTCTTGTACAATGCTTTAATATC 459851
Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373
| |||||| | |||| ||| | ||||||| ||||| ||||| || |||
Sbjct 459852 ATCTGGAATGTTTGGAATGCGCTGAATCGAACCACCCTCCGCAATGATGCGGTTCTTCAT 459911
Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTG 65433
|| ||||||||||||| || | |||| || | ||| | |||||| ||| ||
Sbjct 459912 ATTGTCAGACCACAAACCCATGTCAACGAGATCTTTGAGCAACCAAGGATTGACGACCTG 459971
Query 65434 GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTC 65493
||||||||||| || || ||||| |||||||| || || || || ||| | ||
Sbjct 459972 GAACTCGCCGGCGAGCACGCGACGTGAGTAGATGTTTGAGGTATATGGCTCGAAGCACTC 460031
Query 65494 AGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTT 65553
|||| || || || || | ||| || || ||||||||||| || || | || |||||
Sbjct 460032 GTTGTTACCCAGGATCTGAGAAGTTGAAGCGGTTGGCATGGGCGCCACGAGTAAGGAGTT 460091
Query 65554 TCGCAATCCGTTCATTTCAATGT----TGTGACGCAATTCGTCCCAGTTCCACATCGGTT 65609
|| | || | | ||| || | | ||| || |||||||| ||| | | |
Sbjct 460092 GCGGACACCATGCTTTTTGATCTCAGCTTTGAGGCT----GTCCCAGTCCCAGA---GAT 460144
Query 65610 TATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGG----CCGGT 65665
| || | || ||| |||||| || | |||| | || |||| | ||
Sbjct 460145 CA--GTTGGAGTC-ACGTTCCACATGTCATACTGCAAAATCCC----CTGGGACACGGGC 460197
Query 65666 GAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA-GCTGGTCTCGAG 65724
|| || |||| || || | ||| |||||||| | ||| | | | || ||
Sbjct 460198 GAGCCCTCATAACTCGAATAGGGACCTTGCTCTTTGGCAAGCTCACACGAAGCTGTC-AG 460256
Query 65725 TGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTC 65784
||||| || ||||| || || || | || || ||| ||||| ||
Sbjct 460257 AGCGGCGTGGTATATGGTTTCAAAGATTTGGATGTTCAGCATACGAGCCTCTGGAGAGTC 460316
Query 65785 GTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGG 65844
| | |||| | || || |||| ||||| ||||| || || || | |||||| ||
Sbjct 460317 GAATGGCAGCCGCAGAGCGAGGAAAGCATCGGCAAGACCCTGCACACCGACACCGATAGG 460376
Query 65845 ACGATGACGCAAATT---GGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGAT 65901
||| || | || || | |||| ||||| ||||||||||||| || || |||||
Sbjct 460377 ACGGTGTCTCATGTTACTGTTACGT---GCCTCTGGTACAGGGTAGTGGTTAATGTCGAT 460433
Query 65902 AATGCGATTCAAATTGCGTGTCACCACATGCACGAT-ACGTC--GCAATTGTTCGAAATC 65958
|| ||||| ||||| || ||||| | | || || ||| | | ||| ||
Sbjct 460434 GATCTTGTTCAAGTTGCGA---ACGACATGGCGGGTGACCTCATGCAGCTTCTTGAAGTC 460490
Query 65959 AAAATGTTTAGGACGATCGGGAGTGCCGGACACC-ACAAACTTGGGAAGGGCAAGAGATG 66017
|| | ||| | || |||| | ||||| | || || || ||||| |
Sbjct 460491 -----GTAT-------TCGCCAC-GCATGACATCGACAAAGGTTGGCAGAGCCAGAGAGG 460537
Query 66018 CGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGAT 66077
| | ||| || || || | |||||| || || || ||||| | || |||||||| || |
Sbjct 460538 CCAAGTTACACACCGCGACCTCGTCTGGGGCAGTGTACTCAATGATCTCGGTGCAAAGGT 460597
Query 66078 TACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGT 66137
| || ||| ||||| |||| || | || || |||||||| ||||| || |||||||
Sbjct 460598 TGGAGCTGCGGATGGTTCCCAGGTTTTTCTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGT 460657
Query 66138 ACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAG----- 66192
| | |||| | ||| |||| ||||| || | || || ||||| | ||| ||
Sbjct 460658 AGAGCATGAAGGGATTGCCAGTCTCGGTCTGTGCCTGAAGAATGGCATACCACAGCTTCT 460717
Query 66193 -AGCGCG--TGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAG 66249
||| || || |||| || || ||||| |||| ||||| | ||||| ||
Sbjct 460718 GAGCACGGATGGTCTCACG--ACC-ACGGCCCT-CCTTC----TCGTATTTCTCGTATAG 460769
Query 66250 GTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAG 66309
| || || ||| || | || |||| || | || | | ||||| | ||
Sbjct 460770 GGCCTCAAACTCTTCGCCGTAGACATCGGCGAGGCCAGGTGCTTCATTGGGACAGAAGAG 460829
Query 66310 CGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTA 66369
| ||| ||||| |||||| || || ||| || |||||||| |||| | || ||
Sbjct 460830 TGTCCACATACCATTCTGTTCAACTCGTTTCATGAACAGATCAGGCGTCCACAAAGCATA 460889
Query 66370 GAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTC 66429
||||||||| || || || | ||| || | ||||| || ||||||||||| || | |
Sbjct 460890 GAAGAGATCACGAGCACGGTTCTCTTCCTTACCGTGGTTCTTGCGCAAGTCAAGCCAGCC 460949
Query 66430 AAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCC 66489
||| ||||| ||||||||||| || ||||| |||||||| | || || ||| |||
Sbjct 460950 AAAAATGTCAGCATGCCATGGCTCAAGGTAAATGGCGAAAGCACCGGGGCGCTTGTTGCC 461009
Query 66490 ACCTTGGTCGACGTAGCGAGC---GACATTGTTGAAGACACGCAACATCGGTACGAGCCC 66546
||| || || || || ||||| | ||| || ||||||||||||| || | || ||
Sbjct 461010 ACCCTGATCAACATATCGAGCGGTGGCATCGT---AGACACGCAACATAGGAATTAGACC 461066
Query 66547 GTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATT 66606
||| ||| |||| ||||| || | ||| || || || || || ||| || ||
Sbjct 461067 GTTGGATGTGCCGTTGGTACCACCAATGTACGAACCAGTCGCACGAATGCGGTGTACGTT 461126
Query 66607 CAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCGGAAT 66664
|||||| || |||||||| ||||| || || |||||| || | |||| | |
Sbjct 461127 CAGACCGATGCCACCGGCAGTCTTTGAAATCATAGCACAGGTCTTGAGCGTGTC--GTAG 461184
Query 66665 ATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTG 66724
||||| || ||| ||| |||| || | |||| |||| || || || ||
Sbjct 461185 ATGCCCTCTATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGAGAGCTGCGGCGAC 461244
Query 66725 GGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAA 66784
|| ||| | || || || ||||| | ||||| || ||||| | ||||||||
Sbjct 461245 GGCGTGCCAGCATTAAACAGAGTGGGAGACGCGTGTGTGAAGTACTTATTCGACATGTAG 461304
Query 66785 TTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATC 66844
| ||| ||||| ||| || ||||||| ||| || || || || | ||| |||||
Sbjct 461305 TCGTAAGTCTCAATGGCACTCTCAATGTCTTCACCGTGTATGCCAACCGCAACACGCATA 461364
Query 66845 AGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCC 66904
| | || || || | || ||| | | ||||| | | | |||||| | |||
Sbjct 461365 ATCATGTGCTGTGGTCTCTCTGCCACCTTGCCATTGATTCGGAGAAGGTAGGACCTCTCC 461424
Query 66905 AGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939
| || |||| ||||| ||| ||| ||||| ||
Sbjct 461425 AATGTTTTGAAGCCAAAATACTGGTAGTTGAAGTC 461459
>seq15
Length=603150
Score = 163 bits (180), Expect = 2e-35
Identities = 216/294 (73%), Gaps = 7/294 (2%)
Strand=Plus/Plus
Query 61090 TGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCC 61149
|||||||||||||| ||||| || ||||||||||| | |||||| ||||| |||||
Sbjct 375449 TGGCGCATGTACAAGAAGGCAATGGCATCCTTCTGGACTGCAGAGGAGATCGATCTGTCC 375508
Query 61150 AAAGACATGAATGACTGGGAG---CGT-TTATCGAGCGGTGAACAACATTTCATTAAACA 61205
|| ||||| ||||||| | ||| ||| ||| | || | ||||| ||
Sbjct 375509 AAGGACATTCCTGACTGGAACAACCGTCTTAACGAT-GACGAGCGCTTCTTCATCTCGCA 375567
Query 61206 TGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTT 61265
| | || ||||| ||||| ||||| || ||||| || ||||| || | ||||| ||
Sbjct 375568 CATCCTCGCCTTCTTCGCCGCGTCGGATGGCATCGTGAACGAGAACCTAGTCGAACGCTT 375627
Query 61266 C-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGG 61324
| |||||| || | || | | ||||| || || |||||||||||||||||||||||||
Sbjct 375628 CAGCGCAGAAG-TACAGATTCCAGAGGCACGCTGCTTCTACGGCTTCCAGATTGCCATGG 375686
Query 61325 AGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
|||| | ||||| |||| |||| | || ||||| ||||||||||| ||||
Sbjct 375687 AGAACATTCACTCCGAGACGTACTCGCTGCTTATCGACACGTACATCAGCGAGC 375740
>seq8
Length=997024
Score = 82.4 bits (90), Expect = 6e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 9150 GGCCCCATTTACGGTTTCCAGTGGCGACATTTCGGTGCTCGGTACATCGATTGTCATACG 9209
|| ||| | || |||||||||||||| || ||||| || |||| |||| ||||||
Sbjct 376632 GGTCCCGTATATGGTTTCCAGTGGCGTCACTTCGGAGCGGAGTACGTCGACGCGCATACG 376691
Query 9210 GACTATACGGGCCAAGGTGTGGATCAGTTGGCGCAATGTATGCATCAGATCCAATATGAG 9269
|| |||||||| || |||||||| ||| | ||| | || || || || | | ||
Sbjct 376692 GATTATACGGGGCAGGGTGTGGACCAGCTCGCGGACGTGATCGATAAGCTCAAGAACAAG 376751
Query 9270 CCGAGTAGTCGACGCATGATTATGACTGCCTGGAATCCGAACGATTTGGACAAGATGGTA 9329
||| ||| ||||| || ||| || ||||| || ||| || | || ||||
Sbjct 376752 CCGTACGATCGGCGCATCATCCTGAGCGCGTGGAACCCCGCCGACCTGAAGAAAATGGCC 376811
Query 9330 TTGCCGCCATGCCATATG 9347
||||| || ||||| |||
Sbjct 376812 TTGCCACCTTGCCACATG 376829
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397566221752880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |