Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268145.1_202015-08-
07] 28,081 sequences; 99,189,222 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq16224 158 7e-37
seq5557 86.0 3e-15
>seq16224
Length=81348
Score = 158 bits (174), Expect = 7e-37
Identities = 106/117 (91%), Gaps = 1/117 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| ||||| ||||||||||||||||||||||||| || ||||| | |||||| || ||
Sbjct 65657 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAGAA-ATAACACCGTCC 65715
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 65716 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 65772
>seq5557
Length=585122
Score = 86.0 bits (94), Expect = 3e-15
Identities = 84/107 (79%), Gaps = 1/107 (1%)
Strand=Plus/Plus
Query 11 ACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGT 70
||||| |||| | |||||| | | || || || | |||| | || |||||||||| |
Sbjct 383865 ACTTTAATTTTTTATAAGGTACTAAACGGGTTAAGAA-ATAATACCGTCCGATCCCTAAT 383923
Query 71 CGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|| |||||||| ||||||| ||||||||||||| |||||||||||
Sbjct 383924 CGATATAGTTTATAGTTAAGATTACGACGGTATCTAATCGTCTTCGA 383970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278326708590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |