Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268145.1_202015-08-
07] 28,081 sequences; 99,189,222 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq16224 214 3e-53
seq17569 82.4 1e-13
>seq16224
Length=81348
Score = 214 bits (236), Expect = 3e-53
Identities = 124/128 (97%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 147 CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206
||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 80392 CCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTT 80451
Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 80452 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACTCCGAGGGACTAAAGGATCGA 80511
Query 267 TAGGCCAC 274
||||||||
Sbjct 80512 TAGGCCAC 80519
>seq17569
Length=5207
Score = 82.4 bits (90), Expect = 1e-13
Identities = 58/65 (89%), Gaps = 1/65 (2%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| ||||||||||| | ||| | ||||||||||||||||||||||||||||||
Sbjct 4788 TACTAAGCTCAATTACCATTGCGACGA-GATCATCAGTAGGGTAAAACTAACCTGTCTCA 4730
Query 61 TGACG 65
||||
Sbjct 4729 CGACG 4725
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854160075936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |