Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268145.1_202015-08- 07] 28,081 sequences; 99,189,222 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq5557 89.7 6e-16 >seq5557 Length=585122 Score = 89.7 bits (98), Expect = 6e-16 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||| ||| ||||| | ||||||||||||||||||| || ||||| |||||| Sbjct 384109 CTAGAAATTAACGAAATAAGACTATACGTCCTATTCTATTATTCTATACTAATATATTCG 384168 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 | ||||||| | | || ||||||||||| | || ||||| ||||| |||| Sbjct 384169 AGTATAAGCCTACCTAGAGTACTCTAATTTTTTTAAAGTAAACGTCCTATTTCC 384222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595038084954