Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268145.1_202015-08-
07] 28,081 sequences; 99,189,222 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq16224 645 0.0
>seq16224
Length=81348
Score = 645 bits (714), Expect = 0.0
Identities = 467/550 (85%), Gaps = 18/550 (3%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 80596 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 80655
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||
Sbjct 80656 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTCCGACCCGGGTC 80715
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
|||||||||||||||||||| | |||| ||| || ||| |||| ||||| || |
Sbjct 80716 GGCCCGCGAAGGACCTTAACACTAGAAGTTGGACGT--AAGTCCAGCCCCGCTCCACCGG 80773
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| || | |||||||||||||||| |||||| | |||||||| ||
Sbjct 80774 ATAAGTAAAAAAACAATGGGAGTAGTGGTATTTCACTGGCGCCGGA---GCTCCCACCTA 80830
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||||||||| || ||| |||||||| ||| |||||||||||||||||||||||||||
Sbjct 80831 TTCTACACCTCCCATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 80890
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 80891 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 80950
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 80951 GGGACAGTGGGAATCTCGTTGATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 81010
Query 427 TGGCTACCTTAAGAGAGTCATAGTT-------------ACTCCCGCCGTTTACCCGCGCT 473
|||||||||||||||||||||||||
Sbjct 81011 TGGCTACCTTAAGAGAGTCATAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 81070
Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 81071 NNNNNGAATTACTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 81130
Query 534 TCACTTTCTG 543
|||||||||
Sbjct 81131 CCACTTTCTG 81140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634740819488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |