Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268145.1_202015-08- 07] 28,081 sequences; 99,189,222 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq16224 645 0.0 >seq16224 Length=81348 Score = 645 bits (714), Expect = 0.0 Identities = 467/550 (85%), Gaps = 18/550 (3%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 80596 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 80655 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| || Sbjct 80656 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTCCGACCCGGGTC 80715 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||||||||||||||||||| | |||| ||| || ||| |||| ||||| || | Sbjct 80716 GGCCCGCGAAGGACCTTAACACTAGAAGTTGGACGT--AAGTCCAGCCCCGCTCCACCGG 80773 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| || | |||||||||||||||| |||||| | |||||||| || Sbjct 80774 ATAAGTAAAAAAACAATGGGAGTAGTGGTATTTCACTGGCGCCGGA---GCTCCCACCTA 80830 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||||| || ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 80831 TTCTACACCTCCCATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 80890 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 80891 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 80950 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 80951 GGGACAGTGGGAATCTCGTTGATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 81010 Query 427 TGGCTACCTTAAGAGAGTCATAGTT-------------ACTCCCGCCGTTTACCCGCGCT 473 ||||||||||||||||||||||||| Sbjct 81011 TGGCTACCTTAAGAGAGTCATAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 81070 Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 81071 NNNNNGAATTACTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 81130 Query 534 TCACTTTCTG 543 ||||||||| Sbjct 81131 CCACTTTCTG 81140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634740819488