Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268165.1_202015-08-
07] 38,382 sequences; 100,520,033 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq9080 479 5e-133
seq32512 87.8 3e-15
>seq9080
Length=8040
Score = 479 bits (530), Expect = 5e-133
Identities = 284/295 (96%), Gaps = 1/295 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| ||||||||||| | ||| | ||||||||||||||||||||||||||||||
Sbjct 7296 TACTAAGCTCAATTACCATTGCGACGA-GATCATCAGTAGGGTAAAACTAACCTGTCTCA 7238
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7237 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 7178
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 7177 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 7118
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7117 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 7058
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7057 CAAACTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 7003
>seq32512
Length=5059
Score = 87.8 bits (96), Expect = 3e-15
Identities = 48/48 (100%), Gaps = 0/48 (0%)
Strand=Plus/Minus
Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGA 142
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 48 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854072064192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |