Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268165.1_202015-08-
07] 38,382 sequences; 100,520,033 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq9080 138 1e-30
seq38272 89.7 6e-16
>seq9080
Length=8040
Score = 138 bits (152), Expect = 1e-30
Identities = 150/194 (77%), Gaps = 5/194 (3%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
|||||||||||| ||||| | | |||||||||||| |||||||||||||||||||||||
Sbjct 2060 CTAGAAACCAACGAAATAAGACCACACGTCCTATTCCATTATTCCATGCTAATGTATTCG 2001
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||| | || |||||||||||| |||| ||||| |||||| |||| | ||
Sbjct 2000 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCAAAGTAAACGTCCTGTTTCCCCGACA 1941
Query 126 -CACCAATGAAGG-CATACGGGCTCACCAAGAGGT--AGGGCTGGGTAATGCAGTACTCG 181
| ||| |||||| || | || || || |||| || | || | |||| | ||
Sbjct 1940 CCCCCAGTGAAGGAGATGC-GGTTCCGCAGAAGGTGAAGCCCCGGCCGAACCAGTGCACG 1882
Query 182 CCGTGAGGCGGACC 195
| ||||||||||||
Sbjct 1881 CGGTGAGGCGGACC 1868
>seq38272
Length=182251
Score = 89.7 bits (98), Expect = 6e-16
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||| ||| ||||| | ||||||||||||||||||| || ||||| ||||||
Sbjct 9157 CTAGAAATTAACGAAATAAGACTATACGTCCTATTCTATTATTCTATACTAATATATTCG 9216
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119
| ||||||| | | || ||||||||||| | || ||||| ||||| ||||
Sbjct 9217 AGTATAAGCCTACCTAGAGTACTCTAATTTTTTTAAAGTAAACGTCCTATTTCC 9270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 594978689388
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |