Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268165.1_202015-08- 07] 38,382 sequences; 100,520,033 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq32230 96.9 1e-14 >seq32230 Length=28990 Score = 96.9 bits (106), Expect = 1e-14 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 349075 GTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGC 349134 || ||||||||||||||| | |||| || || || |||||||||| || || ||||| Sbjct 5427 GTTGAGAATCTCCTTGAGACGAGGCACACCGAGCGTAACGTTCTTGGACGACACACCGGC 5368 Query 349135 AAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAG 349194 || ||||| || | || |||| |||||| |||||| || ||| ||||| | || || Sbjct 5367 GAAATGGAAAGTGTTCAGCGTCATCTGCGTCGCGGGCTCACCAATGGACTGGGCTGCCAG 5308 Query 349195 GATGCCTACCATCTCGCCGGG 349215 || || |||||||| || || Sbjct 5307 GACACCGACCATCTCACCAGG 5287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2083688983962836