Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq283 140 3e-28 >seq283 Length=1466191 Score = 140 bits (154), Expect = 3e-28 Identities = 432/662 (65%), Gaps = 6/662 (1%) Strand=Plus/Minus Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATC 66358 ||||| | || | ||||||||| | | || || || |||||| | || || || Sbjct 590658 GGACAGAAAAGGGTCCAATCACCGTTCGACTCAACGCGTTTCATAAACAAGTCTGGAGTC 590599 Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG 66418 ||||| |||||||| | ||| || |||| ||||| ||||||| || ||||| | | Sbjct 590598 CAGAGAGCGTAGAACAAATCACGAGCTCTAACTTCCTCTTTGCCGTGGTTCTTGCGAAGG 590539 Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATA 66478 || | ||||||||| | |||| |||||||| |||| |||||||| || | || Sbjct 590538 TCCAAGAACTCAAAAACATCGGAGTGCCATGGCTCCAAATAGATGGCAAAAGCACCTGGG 590479 Query 66479 CGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGT 66538 || || || |||||||| || || | || ||||| |||| || | ||| || Sbjct 590478 CGCTTATTACCTCCTTGGTCTACATACCTCGCAGTGTTGTTATAGACGCGGAGCATGGGG 590419 Query 66539 ACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCG 66598 || | || ||||| || |||||||| ||||| ||| ||| || || || | Sbjct 590418 ACAATTCCATTAGAAGAACCGTTGGTGCCACCGATGTAGGAGCCTGTAGCACGAATTCTG 590359 Query 66599 TGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TCGGCCAC-TG 66656 || || || ||||| || |||||||||||||| ||||| || ||| || || || Sbjct 590358 TGGACGTTGAGACCGATGCCACCGGCCGTCTTGGAGATCATTGCGCAAGTCTTTAACGTG 590299 Query 66657 TCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGA-ACTAAGT 66715 || | ||||| |||||| || |||| || | ||| | || || |||| | Sbjct 590298 TC--ATAGATGCCTTCAATGCTATCCGCCTTCATATCGACCAGGAAACAAGAGGCTAA-T 590242 Query 66716 TGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGA 66775 |||| | || || | || || | || || | ||| || || ||||| | || Sbjct 590241 TGGGCCTGCGGAGTACCAGCGTTAAATAATGTCGGCGAAGCATGTGTGAAGTACTTCTGA 590182 Query 66776 GACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCA 66835 ||||| | | || || |||||| | ||||||| ||| || || || || | ||| Sbjct 590181 GACATCAAGTGATAAGTTTCGATGGCTTTTTCAATGTCTTCACCGTGTATGCCAACGGCA 590122 Query 66836 CATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAG 66895 |||||||| | || ||| || ||||| | | | | || || | | | ||| Sbjct 590121 ACCCGCATCAGCATGTGTTGTGGACGTTCCGCAACCTTCCCATTAATCCGTAGGAGGTAT 590062 Query 66896 GAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATG 66955 || || || || ||||| | ||| ||| | || ||||| || | ||| |||||| Sbjct 590061 GACCGCTCAAGCGTCTTAAAACCGAAGAAGTTATAGTTGAAGTCACGATCATACACGATA 590002 Query 66956 GC 66957 || Sbjct 590001 GC 590000 Score = 134 bits (148), Expect = 1e-26 Identities = 264/383 (69%), Gaps = 18/383 (5%) Strand=Plus/Minus Query 65813 TCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCT-CGC 65871 || || ||||| | ||| || | | | |||||||||||||| | ||| | ||| ||| Sbjct 591188 TCAGCAAGACCGTTAACACCGAGAGCAATGGGACGATGACGGAGGTTGCT-CTTCTTCGC 591130 Query 65872 CTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATG 65931 |||||| || |||||||| || || ||||| || |||| |||||| | || | Sbjct 591129 CTCAGGGACGGGGTAGTAGTTAATGTCGATGATCTTGTTCAGATTGCGAACAAGAACTCG 591070 Query 65932 CACGATA-CGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACA 65990 |||| | ||| ||| || | | || || | || ||| | ||| || Sbjct 591069 TACGACATCGT-GCAGTTTTCCAAAGTC----------GTAC--TCGCCACGCGCGG-CA 591024 Query 65991 CCA-CAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCG 66049 || |||| | || ||||| | || || |||||||||||||| | |||||||||||| Sbjct 591023 TCAGCAAATGTCGGGAGGGCGATGGAAGCCAGGTTGCAGACAGCAACCTCGTCAGGAGCC 590964 Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109 | || |||||||| |||||||| || ||| || ||| || || ||||| |||| || Sbjct 590963 GAGTATTCGACAATCTCGGTGCAAAGGTTAGAGCTGCGAATAGTTCCCAAGTTCTTCTGG 590904 Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 || ||||| | ||||| | ||||||||||| ||| | || |||| ||||| || Sbjct 590903 TTGCTCTTTCTGTTGCAAGAATCCTTGTACAGCATAAAGGGGTTGCCCGTCTCGGTCTGC 590844 Query 66170 GACTCAATGATGGCGTGCCAAAG 66192 || || | ||| || | |||||| Sbjct 590843 GATTCCAAGATAGCATACCAAAG 590821 Score = 122 bits (134), Expect = 7e-23 Identities = 209/299 (70%), Gaps = 11/299 (4%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| || || ||||| ||||||||||| | || ||| |||| ||| Sbjct 248639 ATCTGGCAAATGTACAAGAAAGCAGAAGCATCCTTCTGGACTGCCGAAGAGATCGACTTG 248698 Query 61147 TCCAAAGACATGAATGACTGG---GAGCGTTTATCGAGCGGTGAACAAC---ATTTCATT 61200 || || ||| | | |||||| || ||||| || || ||| | | | ||||| Sbjct 248699 TCGAAGGACCTCCACGACTGGCATGACCGTTT---GAACGATGACGAGCGCTACTTCATC 248755 Query 61201 AAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260 | ||| | || ||||| || || || ||||| || || || ||||| || |||| Sbjct 248756 TCTCGTGTCCTTGCTTTCTTCGCTGCATCTGACGGCATTGTGAACGAGAACTTGGTGGAG 248815 Query 61261 CGTTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGC 61319 || ||| || | ||||| || | | || || ||||| |||||||||||||| ||| Sbjct 248816 CGCTTCA-GCGGCGAGGTCCAGATTCCCGAAGCTCGTTGCTTCTACGGCTTCCAAATTAT 248874 Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 || ||||| ||||||| |||| ||| | | ||||| || || || ||| ||||| Sbjct 248875 GATTGAGAACATCCACTCCGAGACCTACTCTCTCCTCATTGACACTTATGTCAAGGAGC 248933 Score = 113 bits (124), Expect = 4e-20 Identities = 289/436 (66%), Gaps = 7/436 (2%) Strand=Plus/Plus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || |||||| | || || ||| || || || | ||||| ||| || Sbjct 249111 GCCTTTGCAGCTGTTGAGGGTATCTTCTTTTCTGGGTCTTTCGCATCGATCTTCTGGCTG 249170 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| || || || ||||| || || |||||| || ||| |||| || || ||||| Sbjct 249171 AAGAAGCGCGGTCTGATGCCAGGCCTTACCTTCTCTAACGAGCTGATCTCGCGTGACGAA 249230 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677 || | || ||| |||||| ||||| ||| | |||| | || || Sbjct 249231 GGTCTCCACACTGACTTTGCTTGCTTGCTTTTCTCTC---ATCTCAACCACCGCCCCAGC 249287 Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737 || || | || || | ||||| || || ||||| |||||||| ||||| Sbjct 249288 AAGCAGGTCATCCAAGACATCATCACGGAGGCTGTCACCATCGAGCAGGAATTCCTGACG 249347 Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 || || | |||||| |||| |||| ||||| |||| |||| || || || ||| Sbjct 249348 GATGCCCTTCCCGTCGCACTTCTCGGTATGAACGCCAGACTCATGTGCCAATACATCGAA 249407 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTA-TGAAGCGGAT-CTATAATACGAAAA 61855 || || ||||| || || | || | | || | || || || ||| || | | | Sbjct 249408 TTCGTCGCCGATCGCCTCCTCGTTTCTCTCGGAAATG--GCAAATACTACCATGCCCAGA 249465 Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAAC 61915 |||| |||||||||||||||| ||||| || || |||||||| || || ||||| | Sbjct 249466 ACCCGTTTGATTTCATGGACAACATTTCCCTACCCGGGAAGACGAACTTCTTTGAGAAGC 249525 Query 61916 GTGTAGGCGACTATCA 61931 |||| || || || || Sbjct 249526 GTGTTGGTGATTACCA 249541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565228454080