Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq81 340 3e-91 seq61 219 7e-55 >seq81 Length=10955 Score = 340 bits (376), Expect = 3e-91 Identities = 233/259 (90%), Gaps = 3/259 (1%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| | ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 8535 TACTCGCTGGCCCTGTCAGTGTAACGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 8594 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| ||| || || |||||||||||||||||||||| Sbjct 8595 ACCTGTTATTGCCTCAAACTTCCATCCGCTTGA-GCGGATAGTCCCTCTAAGAAGCCAGC 8653 Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | ||| || | || |||||||||||||||||||||||||||||||||||| |||| Sbjct 8654 GTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 8712 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || |||||||||||||||||||||||||||||||||||||||||| |||| | ||||||| Sbjct 8713 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCGCCCACAAAATCAAG 8772 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 8773 AAAGAGCTCTCAATCTGTC 8791 >seq61 Length=119193 Score = 219 bits (242), Expect = 7e-55 Identities = 205/255 (80%), Gaps = 17/255 (7%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAG----CGCGCGTGCGGCCCAGAACATCTAAGGGCATC 56 |||| | |||||| |||||||||| |||||||||||||||||||||||||||| || Sbjct 74348 TACTAGCTGGCTCTGTCAGTGTAGGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGTGTC 74407 Query 57 ACAGAC---CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTC---CCTCTA 110 |||||| || |||||||||||| |||||| | | || || |||||| | |||| Sbjct 74408 ACAGACGGGCTATTATTGCCTCAAGTTTCCATCCGTTTGA-GCGGATAGTCGGGCTTCTA 74466 Query 111 AGAAGCCAGCCACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTA----AGGTCTCGT 165 |||||||||| | | | || | || ||| |||| ||||||||| ||||||| | Sbjct 74467 AGAAGCCAGCGTACTGCTA-AGGCAATATGGGATATTCAGCAGGTTACCTAAGGTCTCAT 74525 Query 166 TCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCA 225 ||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||| Sbjct 74526 TCGTTATCGGAATCAAGCAGACAAATCACTCCACGAACTAAGAACGGCCATGCACCACCG 74585 Query 226 CCCATAGAATCAAGA 240 |||| | |||||||| Sbjct 74586 CCCACAAAATCAAGA 74600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799228100