Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31]
100 sequences; 40,886,495 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq81 419 4e-115
seq61 183 6e-44
>seq81
Length=10955
Score = 419 bits (464), Expect = 4e-115
Identities = 279/309 (90%), Gaps = 2/309 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | |||||||| | ||| ||||||||||
Sbjct 8700 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 8641
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 8640 AGGGACTATCCGCTCAAGCGGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 8581
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||||||||||||||||||||| ||||||||||| |||| ||||| | | |||||| |
Sbjct 8580 GATGTTCTGGGCCGCACGCGCGTTACACTGACAGGGCCAGCGAGTACTT--CCTTGGTAG 8523
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
|| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 8522 AAATACCTGGGTAATCTTGTTAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 8463
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||||
Sbjct 8462 CTCTTCAACGAGGAATCCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCTG 8403
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 8402 CCCTTTGTA 8394
>seq61
Length=119193
Score = 183 bits (202), Expect = 6e-44
Identities = 187/241 (78%), Gaps = 16/241 (7%)
Strand=Plus/Minus
Query 24 GAGACCTTA----ACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
||||||||| ||||||| |||| || || || || | ||| ||||||||||
Sbjct 74523 GAGACCTTAGGTAACCTGCTGAATATCCCATATTGCCTTAGCAGTACGCTGGCTTCTTAG 74464
Query 80 AGG---GACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAG---GTCTGTGATG 133
| | ||||||| |||||| | ||||||| |||||||||||| || ||||||||
Sbjct 74463 AAGCCCGACTATCCGCTCAAACGGATGGAAACTTGAGGCAATAATAGCCCGTCTGTGACA 74404
Query 134 CCCTTAGATGTTCTGGGCCGCACGCGCG----CTACACTGACAGAGCCAACGAGT--TCA 187
|||||||||||||||||||||||||||| ||||||||||||||||| | ||| |||
Sbjct 74403 CCCTTAGATGTTCTGGGCCGCACGCGCGCTACCTACACTGACAGAGCCAGCTAGTAATCA 74344
Query 188 TCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247
|||||| | || ||||||||| || |||| |||||||||||| |||||||||||
Sbjct 74343 CTTCCTTGGTAGAAATACCTGGGTAATGTTATTAAGCTCTGTCGTGCTCGGGATAGAGCA 74284
Query 248 T 248
|
Sbjct 74283 T 74283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947199052800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |