Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq81 419 4e-115 seq61 183 6e-44 >seq81 Length=10955 Score = 419 bits (464), Expect = 4e-115 Identities = 279/309 (90%), Gaps = 2/309 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | |||||||| | ||| |||||||||| Sbjct 8700 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 8641 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 8640 AGGGACTATCCGCTCAAGCGGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 8581 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||| ||||||||||| |||| ||||| | | |||||| | Sbjct 8580 GATGTTCTGGGCCGCACGCGCGTTACACTGACAGGGCCAGCGAGTACTT--CCTTGGTAG 8523 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 || ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 8522 AAATACCTGGGTAATCTTGTTAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 8463 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| ||||||||||| | ||||||||| ||||||||||||||||||| Sbjct 8462 CTCTTCAACGAGGAATCCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCTG 8403 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 8402 CCCTTTGTA 8394 >seq61 Length=119193 Score = 183 bits (202), Expect = 6e-44 Identities = 187/241 (78%), Gaps = 16/241 (7%) Strand=Plus/Minus Query 24 GAGACCTTA----ACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 ||||||||| ||||||| |||| || || || || | ||| |||||||||| Sbjct 74523 GAGACCTTAGGTAACCTGCTGAATATCCCATATTGCCTTAGCAGTACGCTGGCTTCTTAG 74464 Query 80 AGG---GACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAG---GTCTGTGATG 133 | | ||||||| |||||| | ||||||| |||||||||||| || |||||||| Sbjct 74463 AAGCCCGACTATCCGCTCAAACGGATGGAAACTTGAGGCAATAATAGCCCGTCTGTGACA 74404 Query 134 CCCTTAGATGTTCTGGGCCGCACGCGCG----CTACACTGACAGAGCCAACGAGT--TCA 187 |||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct 74403 CCCTTAGATGTTCTGGGCCGCACGCGCGCTACCTACACTGACAGAGCCAGCTAGTAATCA 74344 Query 188 TCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247 |||||| | || ||||||||| || |||| |||||||||||| ||||||||||| Sbjct 74343 CTTCCTTGGTAGAAATACCTGGGTAATGTTATTAAGCTCTGTCGTGCTCGGGATAGAGCA 74284 Query 248 T 248 | Sbjct 74283 T 74283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199052800