Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31]
100 sequences; 40,886,495 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq81 264 2e-68
>seq81
Length=10955
Score = 264 bits (292), Expect = 2e-68
Identities = 232/280 (83%), Gaps = 8/280 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 3866 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 3809
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3808 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 3749
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| ||||| | |||| ||| | |||| |||||||||||||||||||||| || |
Sbjct 3748 GAACGCGGTGACAC-CTCCCACACGTTGTAGACGGATACGAATAGGCTTCGGCCTCGCAT 3690
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCG-CGGAAG-CGCGGGGCGCTCAGCTGGCGGATTG 238
|||||| ||| | || |||| | |||||| || |||| | | | ||| ||||
Sbjct 3689 CTTAGCTGGC--GATTCGTCCGTCGGGCCGGAAGTGGCCTGGCGGT-ATTTCGCGTATTG 3633
Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| | || ||| || |||||||||||||||||||
Sbjct 3632 TAATTTGAACACGCGTGGGATTAAATCCTTTGCAGACGAC 3593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199206400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |