Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq81 264 2e-68 >seq81 Length=10955 Score = 264 bits (292), Expect = 2e-68 Identities = 232/280 (83%), Gaps = 8/280 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 3866 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 3809 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3808 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 3749 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| ||||| | |||| ||| | |||| |||||||||||||||||||||| || | Sbjct 3748 GAACGCGGTGACAC-CTCCCACACGTTGTAGACGGATACGAATAGGCTTCGGCCTCGCAT 3690 Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCG-CGGAAG-CGCGGGGCGCTCAGCTGGCGGATTG 238 |||||| ||| | || |||| | |||||| || |||| | | | ||| |||| Sbjct 3689 CTTAGCTGGC--GATTCGTCCGTCGGGCCGGAAGTGGCCTGGCGGT-ATTTCGCGTATTG 3633 Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| | || ||| || ||||||||||||||||||| Sbjct 3632 TAATTTGAACACGCGTGGGATTAAATCCTTTGCAGACGAC 3593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199206400