Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq15 273 2e-68 seq1 125 6e-24 >seq15 Length=644973 Score = 273 bits (302), Expect = 2e-68 Identities = 1207/1886 (64%), Gaps = 66/1886 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||| ||||| | || || || |||| || | || ||||||||||| ||| Sbjct 159666 TCGACGGTGAATTGGATGGGGTTGGCGGCAGCCTGAGTACGGAGGTAGTACATGCCCGTC 159725 Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 ||||| || ||| |||| || ||| ||||| | || | || |||| | | |||| Sbjct 159726 TTGAGACCGAGCTT-CCAACCAGTGAAGTGCAT-GCTGGTGATCTTGCCCATGGTAGGCT 159783 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || |||| ||||||| ||| || ||| | ||||| || ||||||| Sbjct 159784 CACGCATGTGAATGTTCAGCGACTGAGACTGGTCAATGAATGCGCCACGGTCGGCAGCCA 159843 Query 65256 TGTCAATGATACGACGTCCC----GATATCTCCCAGACGGTCTTGTACAGGCGACGT-AC 65310 | | | || ||||| || || |||||||| |||||||| || ||| | | Sbjct 159844 TCTGGACGAC----CGTCCGCTGAGAAATTTCCCAGACTGTCTTGTAAAGA-GACTTGAT 159898 Query 65311 CTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACG 65370 || |||| | ||||| ||| | || || | ||||| ||||| || Sbjct 159899 GTCTGCGGGAACGTTGGGAATGTTCTGAATGGAGCCGCCTTCGGCAATGATGCGGTTCTT 159958 Query 65371 CATCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAAC---CAAGTGACGATTGA 65426 ||| || ||||| | ||||| ||| | || | |||| | |||| | |||| Sbjct 159959 CATGCCATCGGACCAAAGACCCATATCCACGAGGTCCTTGAGCAGCCAAGGG----TTGA 160014 Query 65427 TGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAA 65486 ||| ||||||||||| | || ||||| || ||||||||||| ||| || || | Sbjct 160015 CGACCTGGAACTCGCCAGCAAGGACACGGCGAGAGTAGATGTTGGAGGTGTAAGGCTCGA 160074 Query 65487 AGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACA 65546 | |||| ||||||| || || |||| ||| ||||| ||||| || || ||||||| Sbjct 160075 AACATTCGTTGTTGCCCAGGATCTGGGAGGTACTGGCAGTGGGCATAGGGGCCACCAACA 160134 Query 65547 ATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCG 65606 | |||||||| || ||| | || | || || ||||||| ||| | | Sbjct 160135 AACTGTTTCGCACACCATTCTGCTTGATCTGGTCCTTCAGCGTTTCCCAGTCCCAAA--G 160192 Query 65607 GTTTATCGTCG--ACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGG 65664 || || || |||| | ||||| || | || || | || | | || Sbjct 160193 GTCGGACGGCGTGACATTC------CACATGTCGTACTGGAGTATGCCCTGTGAGACAGG 160246 Query 65665 TGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTT-----GACAGCTGGTC 65719 || || | || | ||| |||||| |||| |||| || ||| |||| Sbjct 160247 AGAGCCTTCGTAAGTGGAGTATGGGCCCTCCACCTTAGCAATTTCCGAGGAC-GCTG--- 160302 Query 65720 TCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCG 65779 || || || || || || |||||||| || | || || | | ||||| | | Sbjct 160303 TCAAG-GCAGCGTGGTAGATTGTCTCGAAGATCTGCTTGTTCAGCTGTCTAGCCTC-TGG 160360 Query 65780 CT-CTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACC 65838 | |||| | ||||| | | | | || ||||| || ||||| ||||| || | || Sbjct 160361 CGACTCGAAAGGCATGCGAAGCGCCAAGAAGGTGTCAGCAAGACCCTGAACACCTAGGCC 160420 Query 65839 GATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATC 65898 ||||||||| || |||| ||| | ||||| || ||||||||||| || | || Sbjct 160421 GATGGGACGGTGTCGCATGTTGCTGTTGCGTGCCTCCGGGACAGGGTAGTAGTTCACGTC 160480 Query 65899 GATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTC--GAAA 65956 ||| || |||| ||| | || || || | || ||| | ||| ||| Sbjct 160481 GATGATCTTGTTCAGGTTGTGGACGACGACCTGG--GTAACTTCGTGAAGCTTCTGGAAG 160538 Query 65957 TCAAAATGTTTAGGACGATCG--GGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAG 66014 || || || | | ||| | ||| |||| || || || || |||| Sbjct 160539 TC-----GTATACGCCT-TCGTTGTAGT--------CCACGAAAGATGGTAGCGCGAGAG 160584 Query 66015 ATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACA 66074 |||| | |||||||||||| | ||| || || || | ||||| |||||||| ||||||| Sbjct 160585 ATGCCAAGTTGCAGACAGCGACCTCATCGGGGGCCGAGTACTCCACAATTTCAGTGCACA 160644 Query 66075 GATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCT 66134 | || || ||| |||||||| | |||| || || |||||||| ||||| ||||| Sbjct 160645 GGTTTGAGCTGCGAATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCT 160704 Query 66135 TGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAG 66194 |||| | |||| | || |||| ||||| || | || | ||||| | ||| || Sbjct 160705 TGTAGAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCTTCGAGAATGGCATACCACAGCT 160764 Query 66195 CGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGT 66253 | ||||| ||| | | || ||| | || | ||||| | ||||| | | Sbjct 160765 TCTGGGCCTTGACCTTCTG-ACGGCCGCGGCCCTCAGCCTCGTACTTCTCGTACAAGGCC 160823 Query 66254 TCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGAC 66313 ||||| ||||| | || |||| || | || |||| || || ||||| || | | Sbjct 160824 TCGAACTCATCACCGTAGACATCGGCTAGGCCAGGGCACTCGTTCGGGCACATGAGAGTC 160883 Query 66314 CAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAG 66373 || || || | || || ||||| ||| || || || || ||||| || || |||| Sbjct 160884 CACTCGCCGTTCTTCTCGACACGCTTCATGAAAAGGTCGGGAATCCAAAGAGCAAGGAAG 160943 Query 66374 AGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAG 66433 || ||||| || || |||||| | ||||| || || || | || |||||||| || Sbjct 160944 AGGTCGCGAGCACGGATCTCCTCTTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAA 161003 Query 66434 ATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCT 66493 | || | ||||| || |||| ||||||||| || | || || ||| |||||| Sbjct 161004 ACATCCGAGTGCCACGGCTCCAAGTAGATGGCAAAGGCACCAGGCCGCTTGTTGCCACCC 161063 Query 66494 TGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGAT 66553 || || || || | ||| |||||||||||||| | ||| || |||| || || || Sbjct 161064 TGATCAACATATCTCGCGGTGTTGTTGAAGACACGGAGCATAGGGACGATACCATTGGAC 161123 Query 66554 TTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCA 66613 | || || || ||| ||||| || || || || ||| || | ||||| ||| Sbjct 161124 GTTCCGTTAGTACCGGCGATGTACGAGCCAGTGGCACGAATACGATGGATATTCAAACCG 161183 Query 66614 ATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCA 66673 |||||||||||| |||| ||||| ||||||| || || | | || || || Sbjct 161184 ATACCACCGGCCATCTTGGAGATCATAGCACAAGTTTTCAGGGTATCGTAGATACCCTCG 161243 Query 66674 ATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCG 66733 ||| ||| |||| || | ||| |||| || ||| || | | ||||| | Sbjct 161244 ATGCTATCATCCTTCATATCGACAAGGAAGCAGGATGAAAGCTGCGCCTGAGGTGTACCA 161303 Query 66734 GCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTC 66793 || ||| ||||| || | || || || ||||| | || ||||||| ||||| ||| Sbjct 161304 GCGTTGAAAAGGGTTGGGGAGGCATGAGTGAAGTATTTGCCAGACATGAGGTTGTAGGTC 161363 Query 66794 TCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTAT 66853 || ||||| || | || || || || |||| ||| ||||| | | || Sbjct 161364 TCAATGACCTTCTCTACATTGTCACCCCAGATACCGACAGCAACACGCATAATCATGTGC 161423 Query 66854 TGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTG 66913 || || | ||||| | | | | || | || | |||||| || |||| |||||| Sbjct 161424 TGCGGTCTCTCGACGATCTTGCCATCGAGCTTCAGAAGGTAGGACCGCTCCAAAGTCTTG 161483 Query 66914 ATACCAAAGTACGAGTAATTGAAATC 66939 | || ||||| ||| ||||| || Sbjct 161484 AAGCCGAAGTATTGGTAGTTGAAGTC 161509 >seq1 Length=3626568 Score = 125 bits (138), Expect = 6e-24 Identities = 329/500 (66%), Gaps = 3/500 (1%) Strand=Plus/Plus Query 61432 CGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGA 61491 ||||| || ||||||||| | || ||||| ||| | | | || |||| | || Sbjct 1873290 CGGAAGGCCGATTGGGCCCTGAAGTGGATTACCGACCGGAAGTCCACCTTTGCCCAGCGC 1873349 Query 61492 TTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTT 61551 || | || || || | ||||||||| | || ||||| || | || || | ||||| Sbjct 1873350 CTGATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCGCCTTCGCGTCCATCTTC 1873409 Query 61552 TGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGC 61611 ||| ||||||| || || || |||||||| ||||||||| ||| ||| | || || ||| Sbjct 1873410 TGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCGCGC 1873469 Query 61612 GACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGT 61671 ||||||||| |||| || || || |||| ||| ||| | ||| ||| || Sbjct 1873470 GACGAGGGCCTGCACACCGACTTCGCCTGCCTGCTGTTC--TCGC-ACCTGAAGAACCGC 1873526 Query 61672 CCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTT 61731 ||| ||||| || || | | || || || ||||| ||||| || Sbjct 1873527 CCGAGCAAGGAGATCGTCCAGAAGGTCATCACCGATGCCGTGGAGATCGAGCAGGAGTTC 1873586 Query 61732 CTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTAT 61791 || || || || ||||| | | || |||||||||| || ||| |||||| Sbjct 1873587 CTCACCGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACGCCAACCTCATGAAGCAGTAC 1873646 Query 61792 ATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACG 61851 || || || || |||||||| ||| | |||| | || | | | |||| | Sbjct 1873647 ATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGCAACGACAAGGTCTACCGCTCC 1873706 Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911 | ||||| || || |||||||| | || ||||| | |||||||| || || |||||| Sbjct 1873707 ACCAACCCCTTCGACTTCATGGAGAACATCTCGCTCGGCGGCAAGACCAACTTCTTCGAG 1873766 Query 61912 AAACGTGTAGGCGACTATCA 61931 || || || ||||| || || Sbjct 1873767 AAGCGCGTCGGCGAGTACCA 1873786 Score = 100 bits (110), Expect = 2e-16 Identities = 224/333 (67%), Gaps = 5/333 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||| ||||| ||||||||||| | || ||| |||| || Sbjct 1872884 ATCTGGCAGATGTACAAGAAGCACGAAGCATCCTTCTGGACCGCCGAAGAGATCGACCTG 1872943 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAA--- 61203 ||||| || | | |||||| | | | || ||| | | ||| || Sbjct 1872944 TCCAAGGATCTCCACGACTGGAACAACAGACTCACCGATGACGAGAAGTTCTTTGTTTCG 1873003 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | | || ||||| ||||| || || || || ||||| ||||| | | || || Sbjct 1873004 CACATCCTTGCCTTCTTCGCCGCGTCTGATGGCATTGTCAACGAGAACCTTGTCGAGCGG 1873063 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| || || || | | |||||||| || |||||||| ||||| || ||| Sbjct 1873064 TTCAGTGGCGAAGTCCAGATTCCCGAGGCGCGATGCTTCTACGGTTTCCAAATCATGATG 1873123 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 ||||| ||||||| |||| ||| | | |||||||| |||||||||| ||||| || Sbjct 1873124 GAGAACATCCACTCCGAGACCTACTCTCTGCTCATCGACACGTACATCAAGGAGCCCGCC 1873183 Query 61384 GAACGTGAACGAT-TGTTCAATGCCATCGAGAC 61415 |||| || | | | ||||||||||| || || Sbjct 1873184 CAACG-GACCCACCTCTTCAATGCCATTGACAC 1873215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567515464000