Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xylaria_20sp._20JS573_20[genbank_20GCA_5F000966885.1_202015-03-31] 100 sequences; 40,886,495 total letters Query= NC_034209.1 Length=3170 Score E Sequences producing significant alignments: (Bits) Value seq9 178 3e-41 >seq9 Length=929843 Score = 178 bits (196), Expect = 3e-41 Identities = 223/306 (73%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 1243 ATAGCTCGACCGAAATCACTGTGCCTGTACGGCGAAACAAGACTGTACAAAACAATTTGG 1302 ||||| ||||| || || || || |||| |||| || | ||| ||| ||||| ||| Sbjct 664 ATAGCACGACCAAAGTCGCTATGTCTGTTCGGCCCGACCCGCATGTTCAAGACAATATGG 605 Query 1303 GCACGAAGTCTGGGACCCCACTCTTACATGAGTGGATGTTGGAATGCGAGACTGCTCGAC 1362 |||| ||| | || ||| | |||||||||||||| |||||||| | || | ||| Sbjct 604 ACACGTAGTTTAGGCAACCATGCATACATGAGTGGATGCTGGAATGCAACCCTCTTGGAC 545 Query 1363 GACGACAAGCAGTATGTCGTGATTGATGACGTGCCCTTGGATGACAAGGACATGTTCAAG 1422 | |||| ||| |||| || || || || ||| | ||||||||| ||||||||| Sbjct 544 AGTGCCAAGAGGTACATCGTCATAGACGATGTACCCCTCACTGACAAGGATATGTTCAAG 485 Query 1423 CATTTCAAGCAAATGCTCGGGTGCCAGAATAATTTTTCTGTGACGGACAAGTACGTCAAG 1482 || | ||| |||||||| ||||||||||| || ||||| || |||||||| ||| || | Sbjct 484 CACTACAAACAAATGCTAGGGTGCCAGAACAACTTTTCGGTAACGGACAAATACCTCCGG 425 Query 1483 AAGTTGCACTTCGCGAAGTGGGGGCTGCCATGCATTTACTTGGCCAACCAAGACCCCAGG 1542 || |||| | ||| | ||||| || || || || ||| || | ||| | |||||||| Sbjct 424 AAACTGCATTACGCCGAATGGGGACTACCTTGTATCTACCTGTCAAACGAGGACCCCAGA 365 Query 1543 GAGTAC 1548 || ||| Sbjct 364 GACTAC 359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 10031989027500