Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2482 562 1e-157 seq1885 340 7e-91 >seq2482 Length=8611 Score = 562 bits (622), Expect = 1e-157 Identities = 524/658 (80%), Gaps = 7/658 (1%) Strand=Plus/Minus Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87 |||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||| Sbjct 5551 AGCTCCTTCGACGAGTCGAGTTGTTTAGGAATATAGCTCTAAATAGGAGGTAAATTTCTT 5492 Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 ||||||||||||| ||| |||||||||||||| | ||||||||| |||||||||| ||| Sbjct 5491 CTAAAGCTAAATACCGGCTAGAGACCGATAGCGTATAAGTAGAGTAATCGAAAGATAAAA 5432 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 || ||||| ||||||||||||||||| |||| ||||| || |||||||||||||| ||| Sbjct 5431 AGTACTTTAGAAAGAGAGTTAAAAAGTACGTAAAATTATTAAAAGGGAAGCGCTTATAAC 5372 Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGC 267 |||||| || || | || |||| | ||||| ||||| | | | |||| Sbjct 5371 TAGACTTTAGGGCGGT-GTTCCGCCGGTCTTCTAACCGGTCTACTCTCCGTCC-TAAGGC 5314 Query 268 CAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGC-CCCCTTCGGGGG-GT 325 | || | || || | | ||||||| | || ||||| | || |||| ||||||| || Sbjct 5313 TAATATTATCTAGGACCGCCGGATAA-GACCTTAGGAATATAGCTCCCCCTCGGGGGAGT 5255 Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385 |||||||| || ||| |||| || | | | ||||||||||| ||| ||||| Sbjct 5254 ATTATAGCCTATAGT--AATACGGCGCGTCCCGGGTAAGGTCCGCGCTTCGGTAAGGATA 5197 Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 | ||||||| ||| | ||||||||||||| ||||||||| ||||||||||| |||||| Sbjct 5196 TTAGCGTAATAGTTATTAGCGGCCCGTCTTAAAACACGGACTAAGGAGTCTAATATCTAT 5137 Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505 |||||||| |||| | |||||| | |||| ||| ||||| ||||||||| |||| || Sbjct 5136 ACGAGTGTTCGGGTATTAAACCCCTACGCGGAATAAAAGTAAACGGAGGTAGGAAGGAGT 5077 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 | | || ||||||||||||| || || |||||| ||||| |||||||| |||||| Sbjct 5076 AACCCTATACTATCGACCGATCCTAATATCCTCGGATAGATTTAAGTAAGAGTATAGCTA 5017 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 || ||||||||||||| || |||||| ||| |||||||| |||| |||||||||||| || Sbjct 5016 TTAGGACCCGAAAGATAGTAAACTATACCTAAATAGGGTAAAGCTAGAGGAAACTCTAGT 4957 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||| ||||||||| ||| |||||||||||| |||||| |||||||| |||| Sbjct 4956 AGAGGCTCGTAGCGGTTCTAACGTACAAATCGATCGTTAAATTTAGGTATAGGAGCGA 4899 >seq1885 Length=271 Score = 340 bits (376), Expect = 7e-91 Identities = 240/272 (88%), Gaps = 3/272 (1%) Strand=Plus/Minus Query 317 TCGGGGG-GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCC 375 ||||||| ||||||||||| | |||| ||||||| || | | ||||||||||||| | Sbjct 270 TCGGGGGAGTGTTATAGCCTGTGGTG--ATGCGGCGCGTCCCGGGTGAGGTCCGCGCTTC 213 Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435 ||| |||||| ||||||||| ||||| |||||||||||||| |||||||||||||||||| Sbjct 212 GGCAAGGATGTTGGCGTAATAGTTGTCAGCGGCCCGTCTTGAAACACGGACCAAGGAGTC 153 Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495 ||||||||||||||||||| ||||||||||||| | |||| ||||||||||||||||||| Sbjct 152 TAACATCTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGGAATGAAAGTGAACGGAGGT 93 Query 496 GGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAG 555 ||||| | | | ||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 92 GGGAAGGGGCAACCCTACACCATCGACCGATCCTAATGTCCTCGGATGGATTTGAGTAAG 33 Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAA 587 |||||||||||||||||||||||||||||||| Sbjct 32 AGCATAGCTGTTGGGACCCGAAAGATGGTGAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079921214150