Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2482 239 7e-61 seq1442 78.8 1e-12 >seq2482 Length=8611 Score = 239 bits (264), Expect = 7e-61 Identities = 206/254 (81%), Gaps = 1/254 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| | ||||||| ||| |||||||||| ||||| |||||||||||||| || | ||| Sbjct 6570 ACTCGTTAGCTCCGTTAGTATAGCGCGCGTACGGCCTAGAACATCTAAGGGTATTATAGA 6629 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||| ||||| ||| ||||||| || |||| ||||| ||||||||||||||||||| || Sbjct 6630 CCTATTATTACCTTAAACTTCTATCGGCTT-AAGCCGATAGTCCCTCTAAGAAGCCGGCG 6688 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| | | || | ||||||||| |||||||||||||||||||||||| |||||| Sbjct 6689 ACCCGCTAAAGCGGGCCTAGCTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGTAATTAA 6748 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||| |||| || ||||||||||||| || || || ||| | | ||| ||||| Sbjct 6749 GTAGACAAATTACTCTACTAACTAAGAACGGCTATATACTACTACCTACAAAATTAAGAA 6808 Query 242 AGAGCTATCAATCT 255 |||||| | ||||| Sbjct 6809 AGAGCTCTTAATCT 6822 >seq1442 Length=312 Score = 78.8 bits (86), Expect = 1e-12 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 208 AACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||| | ||||||||||||||| |||||||||| Sbjct 1 AACGGCCATGCACCACCACCCACAAAATCAAGAAAGAGCTCTCAATCTGTC 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796771648113