Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2482 360 3e-97 seq341 77.0 6e-12 >seq2482 Length=8611 Score = 360 bits (398), Expect = 3e-97 Identities = 255/292 (87%), Gaps = 0/292 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||||| ||||| ||| || ||||||| || ||||||||||||||||||| ||| | Sbjct 2821 TACTAAGCGGTATTACTATTAGGACGACGGTTATTAGTAGGGTAAAACTAACCTATCTTA 2880 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||| |||| ||||||||||||||| ||| ||||||| |||||||||||| Sbjct 2881 CGACGGTCTAAACCTAGCTTACGTTCCCTATTAGTAGGTAAACAATCTAACGCTTACCGA 2940 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||| ||| |||| ||||||||||||||||||||||||| |||||| ||||||||||| Sbjct 2941 ATTCTACTTTAGTATAATAGGAAGAGCCGACATCGAAGGATTAAAAAGTAACGTCGCTAT 3000 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||| ||| | | |||| |||||||| | | ||||||||||| | ||||||||||| Sbjct 3001 AAACGCTTAGCTACTATAAGCTAGTTATCCTTATAGTAACTTTTCTAGTACCTCTAGCCT 3060 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 |||||||||||||||||||||||||||||| | ||||| || |||| |||| Sbjct 3061 TAAATTTCGAGGGACTAAAGGATCGATAGGCTATACTTTTATAGTTTATATT 3112 >seq341 Length=240 Score = 77.0 bits (84), Expect = 6e-12 Identities = 42/42 (100%), Gaps = 0/42 (0%) Strand=Plus/Plus Query 254 ACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 42 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854368617888