Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq2482 560 3e-157
seq341 284 4e-74
>seq2482
Length=8611
Score = 560 bits (620), Expect = 3e-157
Identities = 446/536 (83%), Gaps = 3/536 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||| |||||| ||||||||| ||||| || ||||| ||||||||||||| ||||||
Sbjct 3147 CTTTTACTCTACTAGAGATTTCTATTCTCTATAAGTCCTCCTTAGGACACCTACGTTATA 3206
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||| ||||||||||||| ||| |||||||| |||| | ||| | || ||||||||||
Sbjct 3207 GTTTAATAGATGTGCCGCCCTAGCTAAACTCCCTACCTAATAATATTATTAACCCGGATC 3266
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
|||||||||| |||||||||| |||||| || || ||||| |||||||||| ||| |
Sbjct 3267 GGCCCGCGAATAACCTTAACGCTAGAAAACAGTTAGTAAAGACTAGTTCCGCTTTATTAA 3326
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
|||||||||||||||||||||||||| |||||| || |||||||| ||||| || ||
Sbjct 3327 TTAAGTAAAAAAACGATAAGGGTAGTAGTATTTTACCGGCGCCGAA---GCTCCTACCTA 3383
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||| ||| | | || ||| | || | |||||||| ||||| || |||||||||
Sbjct 3384 TTCTATACCCCCTATATCTTTTTATAATATTAAACTAGAGTTAAGCTTAATAGGGTCTTC 3443
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
|||||| || |||| | |||||||||||||| ||| | ||||||||||||||||||||
Sbjct 3444 TTTCCCTACTAATTCTACTAAGCCCGTTCCCTTAGCTATAGTTTCGCTAGATAGTAGATA 3503
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
|||| ||| ||||||||||||||| ||| || ||||| ||||||||||| ||||||||||
Sbjct 3504 GGGATAGTAGGAATCTCGTTAATCTATTTATACGCGTTACTAATTAGATAACGAGGCATT 3563
Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486
| |||||||||||||||| ||||||||||| |||||||||||||||| ||| |||||||
Sbjct 3564 TAGCTACCTTAAGAGAGTTATAGTTACTCCTACCGTTTACCCGCGCTTAGTTAAATTTCT 3623
Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542
| ||||| | ||| |||| ||| || |||||| | ||| ||| || || |||||||
Sbjct 3624 TTACTTTAATATTTAGAGTACTAGGTAGAAATTATATTACGTTAATATTACTTTCT 3679
>seq341
Length=240
Score = 284 bits (314), Expect = 4e-74
Identities = 163/167 (98%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 74 CTTTTGCTCTACTAGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTACGTTATG 133
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 134 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATTAACCCGGATC 193
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGT 173
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 194 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGT 240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635139939104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |