Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq2482 560 3e-157 seq341 284 4e-74 >seq2482 Length=8611 Score = 560 bits (620), Expect = 3e-157 Identities = 446/536 (83%), Gaps = 3/536 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| |||||| ||||||||| ||||| || ||||| ||||||||||||| |||||| Sbjct 3147 CTTTTACTCTACTAGAGATTTCTATTCTCTATAAGTCCTCCTTAGGACACCTACGTTATA 3206 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||| ||||||||||||| ||| |||||||| |||| | ||| | || |||||||||| Sbjct 3207 GTTTAATAGATGTGCCGCCCTAGCTAAACTCCCTACCTAATAATATTATTAACCCGGATC 3266 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||||||||| |||||||||| |||||| || || ||||| |||||||||| ||| | Sbjct 3267 GGCCCGCGAATAACCTTAACGCTAGAAAACAGTTAGTAAAGACTAGTTCCGCTTTATTAA 3326 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||||||||||||||||| |||||| || |||||||| ||||| || || Sbjct 3327 TTAAGTAAAAAAACGATAAGGGTAGTAGTATTTTACCGGCGCCGAA---GCTCCTACCTA 3383 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||| ||| | | || ||| | || | |||||||| ||||| || ||||||||| Sbjct 3384 TTCTATACCCCCTATATCTTTTTATAATATTAAACTAGAGTTAAGCTTAATAGGGTCTTC 3443 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 |||||| || |||| | |||||||||||||| ||| | |||||||||||||||||||| Sbjct 3444 TTTCCCTACTAATTCTACTAAGCCCGTTCCCTTAGCTATAGTTTCGCTAGATAGTAGATA 3503 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||| ||| ||||||||||||||| ||| || ||||| ||||||||||| |||||||||| Sbjct 3504 GGGATAGTAGGAATCTCGTTAATCTATTTATACGCGTTACTAATTAGATAACGAGGCATT 3563 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 | |||||||||||||||| ||||||||||| |||||||||||||||| ||| ||||||| Sbjct 3564 TAGCTACCTTAAGAGAGTTATAGTTACTCCTACCGTTTACCCGCGCTTAGTTAAATTTCT 3623 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542 | ||||| | ||| |||| ||| || |||||| | ||| ||| || || ||||||| Sbjct 3624 TTACTTTAATATTTAGAGTACTAGGTAGAAATTATATTACGTTAATATTACTTTCT 3679 >seq341 Length=240 Score = 284 bits (314), Expect = 4e-74 Identities = 163/167 (98%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 74 CTTTTGCTCTACTAGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTACGTTATG 133 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 134 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATTAACCCGGATC 193 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGT 173 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 194 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGT 240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635139939104