Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2482 592 5e-167 >seq2482 Length=8611 Score = 592 bits (656), Expect = 5e-167 Identities = 431/498 (87%), Gaps = 1/498 (0%) Strand=Plus/Plus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||| |||| ||||| |||||| |||||||| || ||| |||||||||| | |||||||| Sbjct 7542 TACTTATTCTAATTATAAGACCTAAAAGAGCTCTATATTAGTATTTATTATTACTACCTC 7601 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 ||||| |||||||| |||||||| ||||||| || |||||||| ||| | |||||||||| Sbjct 7602 CCCGTATCGGGATTAGGTAATTTACGCGCCTACTACCTTCCTTAGATATAGTAGCCGTTT 7661 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 || |||||||||||||||| ||||||||||||||||||||||||||| | || || |||| Sbjct 7662 CTTAGGCTCCCTCTCCGGAGTCGAACCCTAATTCCCCGTTACCCGTTAAAACTATAGTAG 7721 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 ||| ||||||||| |||||||||| |||||| |||||||| ||| ||| ||||||||| Sbjct 7722 GCCTCTATCCTACTATCGAAAGTTAATAGGGTAGAAATTTAAATAAACTATCGCCGGCGT 7781 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 ||||| || |||||| |||||||||| | | || ||||||||||||||||| || ||| Sbjct 7782 AAGGCTATATAATTCGTAAAGTTATTATAATTTACTAAGGAGCCCCGAAGGGCATTAGTT 7841 Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361 |||||||||||||||| |||||||||||||||| ||||||||| || ||||||||||||| Sbjct 7842 TTTTATCTAATAAATATACCCCTTCCGAAGTCGAGGTTTTTAGTATATATTAGCTCTAGA 7901 Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421 ||||| ||||||||| || |||||||||||||| ||||||||||||||| ||||||| || Sbjct 7902 ATTACTACGGTTATCTATATAGTAAGGTACTATTAAATAAACGATAACTAATTTAATAAG 7961 Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 | ||||| ||||| || |||||| || |||||||||||| || || ||||||||||| | Sbjct 7962 CTATTCGTAGTTTTACCGTATAG-TTACTTATACTTAGATATATATAGCTTAATCTTTAA 8020 Query 482 GACAAGCATATGACTACT 499 || ||| |||| |||||| Sbjct 8021 GATAAGTATATAACTACT 8038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510344523008