Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1589 327 9e-85 seq1655 188 6e-43 >seq1589 Length=144912 Score = 327 bits (362), Expect = 9e-85 Identities = 645/948 (68%), Gaps = 16/948 (2%) Strand=Plus/Minus Query 66000 TGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGA 66059 |||| ||||| |||||||| |||||||| || || | ||| |||||||| || ||||||| Sbjct 47468 TGGGGAGGGCGAGAGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCGA 47409 Query 66060 CAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGC 66119 || |||||||| || || || ||| ||||| ||||| |||| || || ||||||| Sbjct 47408 TGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTGC 47349 Query 66120 GATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGA 66179 ||| || |||||||| | ||||| || ||||||||||| || | ||| | || Sbjct 47348 CGTTGGCAGCGTCCTTGTAGAGGATGTATGGCGTGCCGGTCTCGGTCTGAGCCTCGAGGA 47289 Query 66180 TGGCGTGCCAAAG------AGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTT 66233 |||||| ||| || |||||| | || | ||| ||| | | || | || | Sbjct 47288 TGGCGTACCAGAGCTTCTGAGCGCGGACTGTCTC---ACG-ACC--CTTGCCCTCACGCT 47235 Query 66234 CGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACT 66293 |||| | ||||| || | ||||| | || | || || | ||||| || |||| Sbjct 47234 CGTATCGCTCGTACAGCTCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACT 47175 Query 66294 TGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAG 66353 ||| || ||||||| | |||| | ||| || ||||| ||| || ||||||| Sbjct 47174 CGTGAGGGCACATCAAAGTCCAAGTGGTGTTCTGCTCAACACGCTTCATGAACAGATCAG 47115 Query 66354 GTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGC 66413 | | |||||| ||||||| | |||||| || || |||||| | ||||| || |||| Sbjct 47114 GCACCCAGAGACCGTAGAACAAATCGCGGGCACGAACCTCCTCCTTTCCGTGGTTCTTGC 47055 Query 66414 GCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGC 66473 | | || | ||| |||| || || |||||||| || | ||| |||||||| | | Sbjct 47054 GGAGATCCAAGAAGGAGAAGACATCTGCGTGCCATGGCTCGATGTACATGGCGAAAGCAC 46995 Query 66474 CCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACA 66533 | || ||| ||| || |||||||||||||||||| ||||| || ||||||| || Sbjct 46994 CAGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCA 46935 Query 66534 TCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTA 66593 | |||||||| ||||| ||| | || || || ||| |||| | ||| || || | Sbjct 46934 TGGGTACGAGACCGTTGGATGTTCCGTTTGTACCGCTGATGTATGCTCCAGTCGCGCGGA 46875 Query 66594 TATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATCGGCC 66652 | |||||| || || || || || || || |||| ||||| || || || | Sbjct 46874 TGCGGTGAACGTTGAGTCCGATGCCGCCAGCGTTCTTGGAGATCATGGCGCAGGTCTTCA 46815 Query 66653 A-CTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACT 66711 | |||| | | ||||| |||||| |||| |||| ||| | |||| |||| || Sbjct 46814 AGGTGTC--GTAGATGCCATCAATGCTGTCATCCTTCATGTCGATGAGGAAGCAGGATGC 46757 Query 66712 AAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATG 66771 || || | |||||||| |||| ||| || || || | ||| || || ||||| | Sbjct 46756 CAGCTGAGCGTTGGGTGTTCCGGCGCTGAACAGCGTAGGCGAAGCATGTGTGAAGTACTT 46697 Query 66772 GCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAG 66831 | |||||||| ||||| ||||| ||| ||| ||||||| || || || || || | Sbjct 46696 GTTCGACATGTAGTTGTAGGTCTCAATGGCAGACTCAATGTCATCACCGTGGATGCCAAC 46637 Query 66832 TGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAA 66891 ||| ||||| | | | ||| || | ||| | | | | ||||| || | Sbjct 46636 AGCAACACGCATGATCATCTGTTGTGGTCTCTCGGCAACCTTGCCGTTGATCCTCAGAAG 46577 Query 66892 GTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 ||| || | ||||| ||||||| |||||||| ||| ||||| || Sbjct 46576 GTATGATCTCTCCAGCGTCTTGAATCCAAAGTATTGGTAGTTGAAGTC 46529 >seq1655 Length=66175 Score = 188 bits (208), Expect = 6e-43 Identities = 568/860 (66%), Gaps = 28/860 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| ||||| || Sbjct 51326 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATCGATCTG 51385 Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || | | |||||| | ||| | | ||| || || | ||||| Sbjct 51386 TCCAAGGATCTTCACGACTGGAACAAGCGCCTCAACGA-CGACGAGCGCTTCTTCATCTC 51444 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || |||| ||||| || || || || || |||||||||||||| | | || || Sbjct 51445 TCACGTCCTGGCCTTCTTCGCTGCCTCCGATGGAATCGTCAATGAGAACCTCATTGAGCG 51504 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| | | | |||||||| | | ||||| || || |||||||| ||||| || | Sbjct 51505 CTTCAGTGGA-GAGGTGCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAAATCATGA 51563 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| ||||||| |||| ||| | ||||||||||| |||||||| |||| Sbjct 51564 TGGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGATACATACATCAGCGAGCCCA 51623 Query 61382 CGGAACGTGAACG--ATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGC----GGA 61435 | ||| | ||| | ||||| |||||||| | || || || | | || Sbjct 51624 AGCAAC--GCACGTACCTCTTCAACGCCATCGACAACATCCC----ATGCATCCGTAAGA 51677 Query 61436 AAGCGGATTGGGC-CTTCAATTGGATCACC-AGTACAACGGCTACATTTGGTGAACGATT 61493 | || || ||||| || | | |||||| || | | ||| | || |||| || | Sbjct 51678 AGGCTGACTGGGCGCTGCGA-TGGATCTCCGACAAGAAC-TCGACCTTTGCCTGCCGTCT 51735 Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553 | || ||||| | ||||||| | || ||| ||||| || || | ||||| || Sbjct 51736 CATCGCCTTTGCCGCCATCGAGGGCATCTTCTTCTCCGGATCATTCGCGTCCATCTTCTG 51795 Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613 ||||||||| ||||| || |||||||| || |||||| ||| ||| | || || || || Sbjct 51796 GTTGAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGA 51855 Query 61614 CGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC 61673 |||||||||||| || || || |||| ||| | | || || || Sbjct 51856 CGAGGGCATGCACACCGACTTCGCCTGCCTGCTGTTC---TCCCACCTCAACAACAAGCC 51912 Query 61674 GTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCT 61733 || | || ||| | || || | ||||| || ||||| ||||| ||||| Sbjct 51913 ATCAAACCAGGTTGTTGAAGACATCATCACCGAGGCCGTTGTCATCGAGCAGGAGTTTCT 51972 Query 61734 GACTGACGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATA 61792 || ||||| | ||| | | | ||| |||| ||||| || |||| ||||| | Sbjct 51973 CACAGACGCCCT-CCCATGTGCGCTCCTCGGAATGAACGCCAAGCTCATGTGCCAGTACA 52031 Query 61793 TTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGA 61852 | || || || ||||||||||| | | | | || | || | ||| || | | Sbjct 52032 TCGAGTTCGTCGCCGACCGTCTCCTCCTGGCACTCGGCAACCAGAAGCACTACAACGCCA 52091 Query 61853 AAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGA 61912 |||||| || || || ||||| | || || || | ||||| || || || ||||||| Sbjct 52092 CAAACCCCTTCGACTTTATGGAGAACATCTCCCTCGGAGGCAAAACCAACTTCTTCGAGA 52151 Query 61913 AACGTGTAGGCGACTATCAA 61932 | ||||| |||||||| ||| Sbjct 52152 AGCGTGTCGGCGACTACCAA 52171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397550202992720