Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1589 327 9e-85
seq1655 188 6e-43
>seq1589
Length=144912
Score = 327 bits (362), Expect = 9e-85
Identities = 645/948 (68%), Gaps = 16/948 (2%)
Strand=Plus/Minus
Query 66000 TGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGA 66059
|||| ||||| |||||||| |||||||| || || | ||| |||||||| || |||||||
Sbjct 47468 TGGGGAGGGCGAGAGATGCAAGGTTGCACACGGCGACCTCATCAGGAGCAGTGTACTCGA 47409
Query 66060 CAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGC 66119
|| |||||||| || || || ||| ||||| ||||| |||| || || |||||||
Sbjct 47408 TGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTGC 47349
Query 66120 GATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGA 66179
||| || |||||||| | ||||| || ||||||||||| || | ||| | ||
Sbjct 47348 CGTTGGCAGCGTCCTTGTAGAGGATGTATGGCGTGCCGGTCTCGGTCTGAGCCTCGAGGA 47289
Query 66180 TGGCGTGCCAAAG------AGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTT 66233
|||||| ||| || |||||| | || | ||| ||| | | || | || |
Sbjct 47288 TGGCGTACCAGAGCTTCTGAGCGCGGACTGTCTC---ACG-ACC--CTTGCCCTCACGCT 47235
Query 66234 CGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACT 66293
|||| | ||||| || | ||||| | || | || || | ||||| || ||||
Sbjct 47234 CGTATCGCTCGTACAGCTCCTCGAACTCAGCGCCGTAGACATCAGCCAGACCGGGGCACT 47175
Query 66294 TGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAG 66353
||| || ||||||| | |||| | ||| || ||||| ||| || |||||||
Sbjct 47174 CGTGAGGGCACATCAAAGTCCAAGTGGTGTTCTGCTCAACACGCTTCATGAACAGATCAG 47115
Query 66354 GTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGC 66413
| | |||||| ||||||| | |||||| || || |||||| | ||||| || ||||
Sbjct 47114 GCACCCAGAGACCGTAGAACAAATCGCGGGCACGAACCTCCTCCTTTCCGTGGTTCTTGC 47055
Query 66414 GCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGC 66473
| | || | ||| |||| || || |||||||| || | ||| |||||||| | |
Sbjct 47054 GGAGATCCAAGAAGGAGAAGACATCTGCGTGCCATGGCTCGATGTACATGGCGAAAGCAC 46995
Query 66474 CCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACA 66533
| || ||| ||| || |||||||||||||||||| ||||| || ||||||| ||
Sbjct 46994 CAGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTAAACACACGCAGCA 46935
Query 66534 TCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTA 66593
| |||||||| ||||| ||| | || || || ||| |||| | ||| || || |
Sbjct 46934 TGGGTACGAGACCGTTGGATGTTCCGTTTGTACCGCTGATGTATGCTCCAGTCGCGCGGA 46875
Query 66594 TATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATCGGCC 66652
| |||||| || || || || || || || |||| ||||| || || || |
Sbjct 46874 TGCGGTGAACGTTGAGTCCGATGCCGCCAGCGTTCTTGGAGATCATGGCGCAGGTCTTCA 46815
Query 66653 A-CTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACT 66711
| |||| | | ||||| |||||| |||| |||| ||| | |||| |||| ||
Sbjct 46814 AGGTGTC--GTAGATGCCATCAATGCTGTCATCCTTCATGTCGATGAGGAAGCAGGATGC 46757
Query 66712 AAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATG 66771
|| || | |||||||| |||| ||| || || || | ||| || || ||||| |
Sbjct 46756 CAGCTGAGCGTTGGGTGTTCCGGCGCTGAACAGCGTAGGCGAAGCATGTGTGAAGTACTT 46697
Query 66772 GCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAG 66831
| |||||||| ||||| ||||| ||| ||| ||||||| || || || || || |
Sbjct 46696 GTTCGACATGTAGTTGTAGGTCTCAATGGCAGACTCAATGTCATCACCGTGGATGCCAAC 46637
Query 66832 TGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAA 66891
||| ||||| | | | ||| || | ||| | | | | ||||| || |
Sbjct 46636 AGCAACACGCATGATCATCTGTTGTGGTCTCTCGGCAACCTTGCCGTTGATCCTCAGAAG 46577
Query 66892 GTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939
||| || | ||||| ||||||| |||||||| ||| ||||| ||
Sbjct 46576 GTATGATCTCTCCAGCGTCTTGAATCCAAAGTATTGGTAGTTGAAGTC 46529
>seq1655
Length=66175
Score = 188 bits (208), Expect = 6e-43
Identities = 568/860 (66%), Gaps = 28/860 (3%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || || || |||||||| | |||||| ||||| ||
Sbjct 51326 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATCGATCTG 51385
Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202
||||| || | | |||||| | ||| | | ||| || || | |||||
Sbjct 51386 TCCAAGGATCTTCACGACTGGAACAAGCGCCTCAACGA-CGACGAGCGCTTCTTCATCTC 51444
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| || |||| ||||| || || || || || |||||||||||||| | | || ||
Sbjct 51445 TCACGTCCTGGCCTTCTTCGCTGCCTCCGATGGAATCGTCAATGAGAACCTCATTGAGCG 51504
Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| | | | |||||||| | | ||||| || || |||||||| ||||| || |
Sbjct 51505 CTTCAGTGGA-GAGGTGCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAAATCATGA 51563
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381
||||||| ||||||| |||| ||| | ||||||||||| |||||||| ||||
Sbjct 51564 TGGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGATACATACATCAGCGAGCCCA 51623
Query 61382 CGGAACGTGAACG--ATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGC----GGA 61435
| ||| | ||| | ||||| |||||||| | || || || | | ||
Sbjct 51624 AGCAAC--GCACGTACCTCTTCAACGCCATCGACAACATCCC----ATGCATCCGTAAGA 51677
Query 61436 AAGCGGATTGGGC-CTTCAATTGGATCACC-AGTACAACGGCTACATTTGGTGAACGATT 61493
| || || ||||| || | | |||||| || | | ||| | || |||| || |
Sbjct 51678 AGGCTGACTGGGCGCTGCGA-TGGATCTCCGACAAGAAC-TCGACCTTTGCCTGCCGTCT 51735
Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553
| || ||||| | ||||||| | || ||| ||||| || || | ||||| ||
Sbjct 51736 CATCGCCTTTGCCGCCATCGAGGGCATCTTCTTCTCCGGATCATTCGCGTCCATCTTCTG 51795
Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613
||||||||| ||||| || |||||||| || |||||| ||| ||| | || || || ||
Sbjct 51796 GTTGAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGTGA 51855
Query 61614 CGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC 61673
|||||||||||| || || || |||| ||| | | || || ||
Sbjct 51856 CGAGGGCATGCACACCGACTTCGCCTGCCTGCTGTTC---TCCCACCTCAACAACAAGCC 51912
Query 61674 GTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCT 61733
|| | || ||| | || || | ||||| || ||||| ||||| |||||
Sbjct 51913 ATCAAACCAGGTTGTTGAAGACATCATCACCGAGGCCGTTGTCATCGAGCAGGAGTTTCT 51972
Query 61734 GACTGACGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATA 61792
|| ||||| | ||| | | | ||| |||| ||||| || |||| ||||| |
Sbjct 51973 CACAGACGCCCT-CCCATGTGCGCTCCTCGGAATGAACGCCAAGCTCATGTGCCAGTACA 52031
Query 61793 TTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGA 61852
| || || || ||||||||||| | | | | || | || | ||| || | |
Sbjct 52032 TCGAGTTCGTCGCCGACCGTCTCCTCCTGGCACTCGGCAACCAGAAGCACTACAACGCCA 52091
Query 61853 AAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGA 61912
|||||| || || || ||||| | || || || | ||||| || || || |||||||
Sbjct 52092 CAAACCCCTTCGACTTTATGGAGAACATCTCCCTCGGAGGCAAAACCAACTTCTTCGAGA 52151
Query 61913 AACGTGTAGGCGACTATCAA 61932
| ||||| |||||||| |||
Sbjct 52152 AGCGTGTCGGCGACTACCAA 52171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397550202992720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |