Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq1275 91.5 6e-13
seq3464 87.8 7e-12
>seq1275
Length=166772
Score = 91.5 bits (100), Expect = 6e-13
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 364379 CCTCGCAAGGCTCCCACCTTGGAGGCTACAATCTCCATGAGCTTACCAATAGTCATACGA 364438
||| | | ||| || ||||||||| | | ||| || | | | | || ||||||||
Sbjct 20262 CCTTGGAGGGCGCCGACCTTGGAGAGGAGACACTCGATCAAATGAGCGATTGTCATACGG 20321
Query 364439 GAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCGGTAAAGGGC 364498
|||||||||| | ||||||||||||| ||||| || | || || |||| || |||
Sbjct 20322 GAGGGAATGGCGTGAGGGTTGATGATAATGTCGGGTGTGAGACCATCGGCGGAGAAAGGC 20381
Query 364499 ATATCTTC-GGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGCGAGAAGCAAA 364557
|| ||||| || || | | ||| || ||||| |||||||| | | ||||| || ||
Sbjct 20382 ATGTCTTCTTGGCGGTA-GGTGATGCCGATGGTACCCTTTTGTCCGTGACGAGAGGCGAA 20440
Query 364558 CTTGTCGCCAAT 364569
|||||| || ||
Sbjct 20441 CTTGTCTCCGAT 20452
>seq3464
Length=60611
Score = 87.8 bits (96), Expect = 7e-12
Identities = 174/256 (68%), Gaps = 4/256 (2%)
Strand=Plus/Minus
Query 12734 ACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCA 12793
|||||||| ||| || |||||||| | |||| || ||||| || | ||| | |||
Sbjct 44184 ACATCGTAGTAGATGACCTTCATGCCCATCGACTCCGCCAGGACGGAAAGCTGTGCTCCA 44125
Query 12794 ATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACC--TTGAG 12851
| || || || || | || || || ||||||||||| ||||| | ||| || ||||
Sbjct 44124 ACGTGTCCGTATCCGATGATTCCCAGTGTCTTTCCTCTTACTTCCCAGCATCCAGCTGAG 44065
Query 12852 AAGTCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAA 12911
| ||||||||| | ||||||||| | || ||| | | || |||| ||| || | |
Sbjct 44064 A--CCTTGTTCCACACGCCTTGGTGCATCTCATTGCTGCGGTCACCAATCTGTCGTGCTA 44007
Query 12912 GATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAAT 12971
| || | | ||| || ||||| || || ||| | | ||||| || || || |
Sbjct 44006 GCGCGATGATCTCTCCAATCATGAGTTCGGCGACGGAGCGCGAGTTGCTGAATGGCGAGT 43947
Query 12972 TAAAGACTGCAATGCC 12987
| ||||| || || ||
Sbjct 43946 TGAAGACGGCGATACC 43931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884797696656989
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |