Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq4075 89.7 1e-15 >seq4075 Length=8991 Score = 89.7 bits (98), Expect = 1e-15 Identities = 188/279 (67%), Gaps = 10/279 (4%) Strand=Plus/Plus Query 10 ACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATC 69 |||| |||| ||||| ||| ||||||||||||| | | |||||||| ||| Sbjct 6309 ACTGTATCTGCACAGTTATTCCAATTTCACTGAGACAATCATTGAGACAGCTGTTGTATC 6368 Query 70 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 129 |||| ||||| |||| | | | | ||| | | || || ||| ||||||||||||||| Sbjct 6369 GTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCC 6428 Query 130 TTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT--------TCGCGTTAG 181 | || | || ||||||| || | |||| ||| |||| | || | | || Sbjct 6429 TCATCGGTAAGGCCGCCATTGATTGGGGGTTCCTTCAAAACCTAGCCTATATTTATTCAG 6488 Query 182 CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT- 240 |||| || |||||| || || ||||||| |||||| | |||| | | || Sbjct 6489 CTAAGAAAATTCGTTAACCAGCCAACATCGGGCAGAAATCACACTCAATACTTTGATTTA 6548 Query 241 TCGTGTT-TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | || |||| |||||| |||||| | |||||||||| Sbjct 6549 AAATCTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCG 6587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260723469440