Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31]
6,070 sequences; 31,914,300 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq5555 212 1e-52
>seq5555
Length=326
Score = 212 bits (234), Expect = 1e-52
Identities = 211/267 (79%), Gaps = 16/267 (6%)
Strand=Plus/Minus
Query 27 ATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATT 86
||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||
Sbjct 325 ATAATTGGTTTTTGCGGCTGTCTGATCAGGCATTGCCGCGAAGCTACCATCCGCTGGATT 266
Query 87 ATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGA-TTCTCTCCT--GCA 143
|||||||||||||||||||||||||||||||| |||||| ||||| |||| | || ||
Sbjct 265 ATGGCTGAACGCCTCTAAGTCAGAATCCATGCTAGAACGCGGTGATTTCTTTGCTCCACA 206
Query 144 CATCGTAGTCGGATACGAAT-AGGCTT--------CGGCCCCGAACCTTAGCAGGCCGGC 194
|| ||| |||||||||| |||| | || | | ||||| |||||||| ||
Sbjct 205 CAATATAGATGGATACGAATAAGGCGTCCTTGTGGCGTCGCTGAACCATAGCAGGCTAGC 146
Query 195 AACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATG 251
||||| || |||||| || ||| ||| ||||||| |||||||| ||| ||
Sbjct 145 AACGGTGCACTTGGCGGAAAGGCCTTGGGTGCT-TGCTGGCGAATTGCAATGTCATTTTG 87
Query 252 CGCAGGGATAAATCCTTTGCAGACGAC 278
|| |||||||||| |||| | |||||
Sbjct 86 CGTGGGGATAAATCATTTGTATACGAC 60
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819151828480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |