Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq5555 212 1e-52 >seq5555 Length=326 Score = 212 bits (234), Expect = 1e-52 Identities = 211/267 (79%), Gaps = 16/267 (6%) Strand=Plus/Minus Query 27 ATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATT 86 ||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||| Sbjct 325 ATAATTGGTTTTTGCGGCTGTCTGATCAGGCATTGCCGCGAAGCTACCATCCGCTGGATT 266 Query 87 ATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGA-TTCTCTCCT--GCA 143 |||||||||||||||||||||||||||||||| |||||| ||||| |||| | || || Sbjct 265 ATGGCTGAACGCCTCTAAGTCAGAATCCATGCTAGAACGCGGTGATTTCTTTGCTCCACA 206 Query 144 CATCGTAGTCGGATACGAAT-AGGCTT--------CGGCCCCGAACCTTAGCAGGCCGGC 194 || ||| |||||||||| |||| | || | | ||||| |||||||| || Sbjct 205 CAATATAGATGGATACGAATAAGGCGTCCTTGTGGCGTCGCTGAACCATAGCAGGCTAGC 146 Query 195 AACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATG 251 ||||| || |||||| || ||| ||| ||||||| |||||||| ||| || Sbjct 145 AACGGTGCACTTGGCGGAAAGGCCTTGGGTGCT-TGCTGGCGAATTGCAATGTCATTTTG 87 Query 252 CGCAGGGATAAATCCTTTGCAGACGAC 278 || |||||||||| |||| | ||||| Sbjct 86 CGTGGGGATAAATCATTTGTATACGAC 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819151828480