Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq383 336 4e-90 >seq383 Length=270 Score = 336 bits (372), Expect = 4e-90 Identities = 239/272 (88%), Gaps = 3/272 (1%) Strand=Plus/Plus Query 26 GACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGAC 85 ||||||||||| |||||||| || || || || ||| | |||||||||||||| Sbjct 1 GACCTTAACCTACTAAATAGTGGTGCTAGCATTTGCTGGTTATCCACTTCTTAGAGGGAC 60 Query 86 TATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144 |||||| | |||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 61 TATCGGTTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGACGT 120 Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204 ||||||||||||||||||||||||||| |||||| ||||| | |||||||||| ||| Sbjct 121 TCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGT--CTAACCTTGGCCGAGAGG 178 Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264 ||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 179 TCTTGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATTGCTCTT 238 Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATC 296 ||||||||||| |||||||||||| |||||| Sbjct 239 CAACGAGGAATTCCTAGTAAGCGCAAGTCATC 270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947167984640