Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20pseudotritici_20[genbank_20GCA_5F000983605.1_202015- 04-30] 3,380 sequences; 36,798,086 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq2704 96.9 1e-14 >seq2704 Length=262699 Score = 96.9 bits (106), Expect = 1e-14 Identities = 145/202 (72%), Gaps = 3/202 (1%) Strand=Plus/Minus Query 364370 ACCCTCTCT-CCTCGCAAGGCTCCCACCTTGGAGGCTACAATCTCCATGAGCTTACCAAT 364428 ||||||| ||| | | ||| || ||||||||| | | ||| || | | | || Sbjct 27705 ACCCTCTTGGCCTTGGAGGGCGCCGACCTTGGAGAGGAGACACTCGATCAAATGGGCGAT 27646 Query 364429 AGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGC 364488 |||||||| |||||||||| | ||||||||||||||||||| || | || || || Sbjct 27645 TGTCATACGGGAGGGAATGGCGTGAGGGTTGATGATGATGTCGGGTGTGAGACCATCTGC 27586 Query 364489 GGTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGC 364547 || || ||||| ||||| || || | | ||| ||| ||||| |||||||| | | | Sbjct 27585 GGAGAAAGGCATGTCTTCTTGGCGGTA-GGTGATACCGATGGTACCCTTTTGTCCGTGAC 27527 Query 364548 GAGAAGCAAACTTGTCGCCAAT 364569 |||| || |||||||| || || Sbjct 27526 GAGAGGCGAACTTGTCTCCGAT 27505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884804772638340