Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2 374 2e-101 seq9 134 3e-29 seq11 123 5e-26 >seq2 Length=1749581 Score = 374 bits (414), Expect = 2e-101 Identities = 271/309 (88%), Gaps = 6/309 (2%) Strand=Plus/Plus Query 14 CGGGCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGAC 72 || |||||||||||||| | || |||||||| || | ||| || || ||||||| Sbjct 507645 CGAGCCTTTCCTTCTGGTTAACCATTATGCCCTTAACARG-TGTAGTGGCGATCCAGGAC 507703 Query 73 TTTTACTTTGAAAAAATTAGA--GTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 |||||||||||||||| | | | |||||||||||||||||||||||||| |||||||| Sbjct 507704 TTTTACTTTGAAAAAAAAAAAAAGGGTTCAAAGCAGGCCTTTGCTCGAATATATTAGCAT 507763 Query 131 GGAATAATAGAATAGGACGTGC-GGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 ||||||||||||||||| || ||||||||||||||||||||||||||| |||||||| Sbjct 507764 GGAATAATAGAATAGGAYGTTATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGA 507823 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 507824 TTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 507883 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 ||||||||||||||||||||||| || |||||||||||||||||||||| ||||||| Sbjct 507884 TTGAAGACTAACTACTGCGAAAGMATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAA 507942 Query 310 AGTTAGGGG 318 ||||||||| Sbjct 507943 AGTTAGGGG 507951 >seq9 Length=949999 Score = 134 bits (148), Expect = 3e-29 Identities = 102/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 14 CGGGCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGAC 72 || |||||||||||||| | || |||||||| || || ||| || || ||||||| Sbjct 915913 CGAGCCTTTCCTTCTGGTTAACCATTATGCCCTTAACAGG-TGTAGTGGCGATCCAGGAC 915855 Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 915854 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATATATTAGCAT 915797 >seq11 Length=771230 Score = 123 bits (136), Expect = 5e-26 Identities = 108/132 (82%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 17 GCCTTTCCTTCTGGGGA-TCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTT 75 ||||||||| ||| | || || ||||| || || ||| || || |||| ||||| Sbjct 68960 GCCTTTCCTATTGGTCAATCATTATACCCTTAACAGG-TGTAGTGGCGATCCAGAACTTT 68902 Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAAT 135 ||||||||| ||||||||||||||||| ||| |||||||||||||| |||| |||||||| Sbjct 68901 TACTTTGAACAAATTAGAGTGTTCAAAACAGACCTTTGCTCGAATATATTAACATGGAAT 68842 Query 136 AATAGAATAGGA 147 ||| |||||||| Sbjct 68841 AATGGAATAGGA 68830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915198755328