Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq5 158 2e-36
seq10 141 2e-31
seq18 78.8 2e-12
>seq5
Length=1301127
Score = 158 bits (174), Expect = 2e-36
Identities = 133/163 (82%), Gaps = 8/163 (5%)
Strand=Plus/Minus
Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89
|| || |||| | |||||| ||| || ||||||||||||||||||||||||||||||
Sbjct 877738 GTTATAAGTATTGCAAAACTTACCCGTATCATGACGGTCTAAACCCAGCTCACGTTCCTA 877679
Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
||||||||||||| ||||| || |||||||||||| |||||||||||||||| |
Sbjct 877678 ATTAGTGGGTGAAAAATCC-------ACAGAATTCTGCTTCAGTATGATAGGAAGAGCTG 877626
Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCT 192
| | ||| || ||||||||| |||||||||||||||| ||
Sbjct 877625 GCGT-GAAAAATAAAAAAGCAATTTCGCTATGAACGCTTGACT 877584
>seq10
Length=798825
Score = 141 bits (156), Expect = 2e-31
Identities = 139/179 (78%), Gaps = 8/179 (4%)
Strand=Plus/Plus
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||| | ||||||||| |||||| || |||| ||||||||||| | ||||||
Sbjct 38757 ATTCTGCTTTAGGATGATAGGAGGAGCCGGAATTGAAGAATCAAAAAGCATTGCCGCTAT 38816
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
|||| ||| | ||||||| | |||| || ||| | |||||||| || ||||||| |||
Sbjct 38817 GAACTCTTCACAGCCACAACCTAGTTCTCAGTGTAGCAACTTTTCAGGTACCTCTAACCT 38876
Query 241 CAAATTTCGAGGG-----ACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294
|||||| || ||| ||||||| |||| |||| |||||||| ||| |||||||
Sbjct 38877 CAAATTCCGCGGGCTATAGCTAAAGG---GATAAGCCATACTTTCATTGTTGGTATTCA 38932
>seq18
Length=598694
Score = 78.8 bits (86), Expect = 2e-12
Identities = 48/51 (94%), Gaps = 0/51 (0%)
Strand=Plus/Plus
Query 245 TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||| || |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 451281 TTTTGAAGGACTAAAAGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 451331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854398838016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |