Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq2 122 1e-25 seq9 105 8e-21 seq11 91.5 2e-16 >seq2 Length=1749581 Score = 122 bits (134), Expect = 1e-25 Identities = 149/199 (75%), Gaps = 8/199 (4%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCA-CGTCCTATTCTATTATTCCATGCTAATGTATTC 64 ||||||||||||||||||| | | | ||||||||||||||||||||||||| ||||| Sbjct 507809 CTAGAAACCAACAAAATAGAACCATAACRTCCTATTCTATTATTCCATGCTAATATATTC 507750 Query 65 GGGCGTAAGCCTGCTTTGAACAC--TCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCC 122 | || | ||||||||||||| | | | |||| |||| ||||||||||||| || | Sbjct 507749 GAGCAAAGGCCTGCTTTGAACCCTTTTTTTTTTTTTCAAAGTAAAAGTCCTGGATCGCCA 507690 Query 123 GCACACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGT---AATGCAGTAC 178 |||| | || |||||| || | |||| ||| | |||| | | | | |||||| Sbjct 507689 CTACACYTGTTAAGGGCATAATGGTTAACCAGAAGGAAAGGCTCGATTACATTCCAGTAC 507630 Query 179 TCGCC-GTGAGGCGGACCA 196 ||||| |||||||||| Sbjct 507629 TCGCCAAAAAGGCGGACCA 507611 >seq9 Length=949999 Score = 105 bits (116), Expect = 8e-21 Identities = 128/171 (75%), Gaps = 5/171 (3%) Strand=Plus/Plus Query 51 ATGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 |||||||| |||||| || | |||||||||||||||||||||||| |||| |||||||| Sbjct 915797 ATGCTAATATATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGT 915856 Query 111 CCTGGTTCCTCCGCACACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGT- 168 ||||| || | ||||| | || |||||| || | |||| ||| | |||| | | Sbjct 915857 CCTGGATCGCCACTACACCTGTTAAGGGCATAATGGTTAACCAGAAGGAAAGGCTCGATT 915916 Query 169 --AATGCAGTACTCGCC-GTGAGGCGGACCATAGCACCCAGCCCGAGTTTC 216 | | ||||||||||| |||||||||| ||| ||||| || ||| Sbjct 915917 ACATTCCAGTACTCGCCAAAAAGGCGGACCAGGTAACCAAGCCCAAGGTTC 915967 >seq11 Length=771230 Score = 91.5 bits (100), Expect = 2e-16 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 34 TCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACTCTAAT 93 |||||||| ||||||||||| |||| |||||| || | | ||| ||||||||||||||| Sbjct 68830 TCCTATTCCATTATTCCATGTTAATATATTCGAGCAAAGGTCTGTTTTGAACACTCTAAT 68889 Query 94 TTTCTCAAGGTAAAAGTCCTGGTTC 118 || |||| |||||||| |||| || Sbjct 68890 TTGTTCAAAGTAAAAGTTCTGGATC 68914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199215824