Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq5 360 6e-97
seq2 80.6 9e-13
>seq5
Length=1301127
Score = 360 bits (398), Expect = 6e-97
Identities = 417/558 (75%), Gaps = 43/558 (8%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGAC--ACCTGCGTTA 64
|| ||| ||| | | |||||||||| || ||||||||| |||| | ||||| |||
Sbjct 877483 CTATTGTTCTGCTGAAGATTTCTGTGCT----GAGTCCCCCGTAGGGCGCACCTGAATTA 877428
Query 65 TGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGA 124
| |||||| |||||||| ||| |||||||||||||||||| | |||| |||| |||||
Sbjct 877427 TCGTTTAATAGATGTGCAGCCTCAGCCAAACTCCCCACCTCATAATGGTTTCAATCCGGA 877368
Query 125 TCGGCCCGCGAAGG--ACCTT-------AACGCCAGAAAATGGTCGGTGAAGACCAGTTC 175
|| || || || | ||| | || | ||| ||| | |||| | || ||
Sbjct 877367 TCAGCT-GCTAAAGCAACCCTGCAATTGAATGATAGAGGCTGGATGATGAACTCTAGCTC 877309
Query 176 CGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACG 235
||||| ||||| | ||| || |||| | || || ||||||||||| | | |||||
Sbjct 877308 CGCTTAATTGAATTAGTCAAGAAACAACAAACGTGGTGGTATTTCAAATTCACCGAA--- 877252
Query 236 GCTCCCACTTATTCTACACC------------TCTCAAGTCATTTCACAAAGTCGGACTA 283
|||||||| ||||| || ||| || | |||||||| ||| ||||
Sbjct 877251 GCTCCCACCAATTCTGCAGTGAATTTATATTATCTATAG-CTTTTCACAATGTCAAACTA 877193
Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCT 343
||||||||||| || || |||||||||| ||||||| ||| | |||||| ||||||
Sbjct 877192 AAGTCAAGCTCAGCAAAGTTTTCTTTCCCCACTGATTCTACCAGTCACGTTCCTTTGGCT 877133
Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 403
|||| || || || ||||||||||||||||| |||| |||||||||||| |||||||||
Sbjct 877132 GTGGGTTTTCTGGAGAGTAGATAGGGACAGTGTGAATATCGTTAATCCATCCATGCGCGT 877073
Query 404 CACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTT 463
||||| || ||| ||||||||||||||||||||||||||||||||| ||||||||| | |
Sbjct 877072 CACTACTTGGATTACGAGGCATTTGGCTACCTTAAGAGAGTCATAGCTACTCCCGCAGCT 877013
Query 464 TACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAG-------CACTGGGCAGAA 516
|| || |||||||||| |||||| ||| ||||| | || || |||||| ||
Sbjct 877012 TA---ACGTTTGGTTGAATGTCTTCA-TTTTACATTAAAAGGACTGGCCAGTGGGCAAAA 876957
Query 517 ATCACATTGCGTCAACAT 534
|| |||||||||||||||
Sbjct 876956 ATTACATTGCGTCAACAT 876939
>seq2
Length=1749581
Score = 80.6 bits (88), Expect = 9e-13
Identities = 74/91 (81%), Gaps = 5/91 (5%)
Strand=Plus/Plus
Query 213 GGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACA-CCTCTCAAGTCATTTCAC 271
||||||||| ||||||| |||| ||| ||||||||| ||||| | ||| ||||||
Sbjct 1321444 GGTATTTCAAGGTCGCCGAA---GCTCMCACCTATTCTACACCCTCT-ATGTCTTTTCAC 1321499
Query 272 AAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302
|| ||| ||||||||||||| |||||||||
Sbjct 1321500 AATGTCAAACTAGAGTCAAGCCCAACAGGGT 1321530
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635197776128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |