Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq5 360 6e-97 seq2 80.6 9e-13 >seq5 Length=1301127 Score = 360 bits (398), Expect = 6e-97 Identities = 417/558 (75%), Gaps = 43/558 (8%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGAC--ACCTGCGTTA 64 || ||| ||| | | |||||||||| || ||||||||| |||| | ||||| ||| Sbjct 877483 CTATTGTTCTGCTGAAGATTTCTGTGCT----GAGTCCCCCGTAGGGCGCACCTGAATTA 877428 Query 65 TGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGA 124 | |||||| |||||||| ||| |||||||||||||||||| | |||| |||| ||||| Sbjct 877427 TCGTTTAATAGATGTGCAGCCTCAGCCAAACTCCCCACCTCATAATGGTTTCAATCCGGA 877368 Query 125 TCGGCCCGCGAAGG--ACCTT-------AACGCCAGAAAATGGTCGGTGAAGACCAGTTC 175 || || || || | ||| | || | ||| ||| | |||| | || || Sbjct 877367 TCAGCT-GCTAAAGCAACCCTGCAATTGAATGATAGAGGCTGGATGATGAACTCTAGCTC 877309 Query 176 CGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACG 235 ||||| ||||| | ||| || |||| | || || ||||||||||| | | ||||| Sbjct 877308 CGCTTAATTGAATTAGTCAAGAAACAACAAACGTGGTGGTATTTCAAATTCACCGAA--- 877252 Query 236 GCTCCCACTTATTCTACACC------------TCTCAAGTCATTTCACAAAGTCGGACTA 283 |||||||| ||||| || ||| || | |||||||| ||| |||| Sbjct 877251 GCTCCCACCAATTCTGCAGTGAATTTATATTATCTATAG-CTTTTCACAATGTCAAACTA 877193 Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCT 343 ||||||||||| || || |||||||||| ||||||| ||| | |||||| |||||| Sbjct 877192 AAGTCAAGCTCAGCAAAGTTTTCTTTCCCCACTGATTCTACCAGTCACGTTCCTTTGGCT 877133 Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 403 |||| || || || ||||||||||||||||| |||| |||||||||||| ||||||||| Sbjct 877132 GTGGGTTTTCTGGAGAGTAGATAGGGACAGTGTGAATATCGTTAATCCATCCATGCGCGT 877073 Query 404 CACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTT 463 ||||| || ||| ||||||||||||||||||||||||||||||||| ||||||||| | | Sbjct 877072 CACTACTTGGATTACGAGGCATTTGGCTACCTTAAGAGAGTCATAGCTACTCCCGCAGCT 877013 Query 464 TACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAG-------CACTGGGCAGAA 516 || || |||||||||| |||||| ||| ||||| | || || |||||| || Sbjct 877012 TA---ACGTTTGGTTGAATGTCTTCA-TTTTACATTAAAAGGACTGGCCAGTGGGCAAAA 876957 Query 517 ATCACATTGCGTCAACAT 534 || ||||||||||||||| Sbjct 876956 ATTACATTGCGTCAACAT 876939 >seq2 Length=1749581 Score = 80.6 bits (88), Expect = 9e-13 Identities = 74/91 (81%), Gaps = 5/91 (5%) Strand=Plus/Plus Query 213 GGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACA-CCTCTCAAGTCATTTCAC 271 ||||||||| ||||||| |||| ||| ||||||||| ||||| | ||| |||||| Sbjct 1321444 GGTATTTCAAGGTCGCCGAA---GCTCMCACCTATTCTACACCCTCT-ATGTCTTTTCAC 1321499 Query 272 AAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 || ||| ||||||||||||| ||||||||| Sbjct 1321500 AATGTCAAACTAGAGTCAAGCCCAACAGGGT 1321530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635197776128