Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03-
01] 136 sequences; 24,815,695 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq14 127 2e-24
>seq14
Length=670130
Score = 127 bits (140), Expect = 2e-24
Identities = 554/863 (64%), Gaps = 30/863 (3%)
Strand=Plus/Plus
Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125
||||| || ||| | || || |||| ||||| |||||||| ||||| || ||||||
Sbjct 577728 TTCCCAATTAAGTTCCACGAGATCTGGCAAATGTATAAAAAGGCTGAAGCATCTTTCTGG 577787
Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGA------GCGTTTATCG 61179
|| | || || | ||||| ||||| || ||| ||||| || || ||
Sbjct 577788 ACTGCTGAAGAAATTGATTTAAGTAAAGATATTGGTGATTGGGAAAATAAGC-TTAATAA 577846
Query 61180 AGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATC 61239
|| ||| | ||| ||| || || || || || || || ||||| || |||||
Sbjct 577847 AGA--TGAGCGTTTTTTTATTTCACGCGTCTTAGCCTTTTTCGCTGCTTCAGATGGTATT 577904
Query 61240 GTCAATGAGAATTTATTGGAA--CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTT 61297
|| || || |||||| | ||| | ||||| || | |||| ||| | || || |
Sbjct 577905 GTTAACGAAAATTTAGTTGAAAACTTTTCG-GCTG-AGGTTCAAACACCAGAAGCTAAGT 577962
Query 61298 GTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTA--CAGTGTTCT 61355
| || || || ||||| || ||||| ||| | ||||| |||| || || | ||
Sbjct 577963 GCTTTTATGGTTTCCAAATCATGATGGAAAATATACACTCTGAGACATATTCACTATTA- 578021
Query 61356 CATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGAC 61415
|| || || || || | || || |||||| || |||||||| || || |
Sbjct 578022 -ATTGACACATATATTAAAGATTCTAAAGAGCGTGAATTTTTATTCAATGCTATTGAAAA 578080
Query 61416 GATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGT-ACAACG- 61473
| || | ||| ||| || |||||||| || | ||||| | || | || |
Sbjct 578081 TGTTCCTTGTATTAAGAAGAAGGCAGATTGGGCTTTAAGATGGATTA---GTGATAAGGA 578137
Query 61474 -GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGG 61532
|| ||||| |||||| | | || || || | || || ||| | |||||| |||
Sbjct 578138 AGCATTATTTGCTGAACGTCTTGTTGCTTTCGCTGCTGTTGAAGGTATTTTTTTCTCTGG 578197
Query 61533 ATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAG 61592
|| || || | || || ||||| || || | || | ||||| || || || ||
Sbjct 578198 TTCTTTCGCATCTATTTTCTGGTTAAAAAAGAGAGGTTTAATGCCAGGCCTTACTTTTTC 578257
Query 61593 CAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAA 61652
||||| ||||| | || || || || | || |||||||||| || ||||
Sbjct 578258 TAATGAATTGATCTGTCGTGATGAAGGTCTTCACACTGATTTTGCTTGCTTATTATTTTC 578317
Query 61653 ACGCTATCTGGTGAATCGTCCG--TCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCG 61710
| || ||| ||| | || || | | ||| | |||| || |||||
Sbjct 578318 CC---ATTTGGAAAATAGACCCGATCCAATTAT--TGTTGAAAAGATAATTACAGAGGCT 578372
Query 61711 GTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAAT 61770
|||||||| || |||||| | || || ||| | || | |||| | | || ||||||
Sbjct 578373 GTAACTATTGAGAAGGAATACTTTACAGATGCTCTTCCAGCCTCATTACTTGGTATGAAT 578432
Query 61771 TGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGT 61830
|| | |||| || ||| |||||| ||||||||| ||||| || || | | | |||
Sbjct 578433 TGCAATTTGATGTGTCAATATGTTGAATATGTTGCCGATCGTCTTTTAGTTGCTCTAGGT 578492
Query 61831 ATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGAT 61890
| ||| ||| || ||| | || |||||||| |||||||| | ||||| | | |
Sbjct 578493 AACAAGAAGATTTACAATGTTACTAATCCATTTGACTTCATGGAGAATATTTCATTAGCT 578552
Query 61891 GGCAAGACGAATTTTTTCGAGAA 61913
|| ||||| || |||||||||||
Sbjct 578553 GGTAAGACAAACTTTTTCGAGAA 578575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567341031040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |