Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alloascoidea_20hylecoeti_20[genbank_20GCA_5F001600815.1_202016-03- 01] 136 sequences; 24,815,695 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq14 127 2e-24 >seq14 Length=670130 Score = 127 bits (140), Expect = 2e-24 Identities = 554/863 (64%), Gaps = 30/863 (3%) Strand=Plus/Plus Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125 ||||| || ||| | || || |||| ||||| |||||||| ||||| || |||||| Sbjct 577728 TTCCCAATTAAGTTCCACGAGATCTGGCAAATGTATAAAAAGGCTGAAGCATCTTTCTGG 577787 Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGA------GCGTTTATCG 61179 || | || || | ||||| ||||| || ||| ||||| || || || Sbjct 577788 ACTGCTGAAGAAATTGATTTAAGTAAAGATATTGGTGATTGGGAAAATAAGC-TTAATAA 577846 Query 61180 AGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATC 61239 || ||| | ||| ||| || || || || || || || ||||| || ||||| Sbjct 577847 AGA--TGAGCGTTTTTTTATTTCACGCGTCTTAGCCTTTTTCGCTGCTTCAGATGGTATT 577904 Query 61240 GTCAATGAGAATTTATTGGAA--CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTT 61297 || || || |||||| | ||| | ||||| || | |||| ||| | || || | Sbjct 577905 GTTAACGAAAATTTAGTTGAAAACTTTTCG-GCTG-AGGTTCAAACACCAGAAGCTAAGT 577962 Query 61298 GTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTA--CAGTGTTCT 61355 | || || || ||||| || ||||| ||| | ||||| |||| || || | || Sbjct 577963 GCTTTTATGGTTTCCAAATCATGATGGAAAATATACACTCTGAGACATATTCACTATTA- 578021 Query 61356 CATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGAC 61415 || || || || || | || || |||||| || |||||||| || || | Sbjct 578022 -ATTGACACATATATTAAAGATTCTAAAGAGCGTGAATTTTTATTCAATGCTATTGAAAA 578080 Query 61416 GATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGT-ACAACG- 61473 | || | ||| ||| || |||||||| || | ||||| | || | || | Sbjct 578081 TGTTCCTTGTATTAAGAAGAAGGCAGATTGGGCTTTAAGATGGATTA---GTGATAAGGA 578137 Query 61474 -GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGG 61532 || ||||| |||||| | | || || || | || || ||| | |||||| ||| Sbjct 578138 AGCATTATTTGCTGAACGTCTTGTTGCTTTCGCTGCTGTTGAAGGTATTTTTTTCTCTGG 578197 Query 61533 ATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAG 61592 || || || | || || ||||| || || | || | ||||| || || || || Sbjct 578198 TTCTTTCGCATCTATTTTCTGGTTAAAAAAGAGAGGTTTAATGCCAGGCCTTACTTTTTC 578257 Query 61593 CAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAA 61652 ||||| ||||| | || || || || | || |||||||||| || |||| Sbjct 578258 TAATGAATTGATCTGTCGTGATGAAGGTCTTCACACTGATTTTGCTTGCTTATTATTTTC 578317 Query 61653 ACGCTATCTGGTGAATCGTCCG--TCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCG 61710 | || ||| ||| | || || | | ||| | |||| || ||||| Sbjct 578318 CC---ATTTGGAAAATAGACCCGATCCAATTAT--TGTTGAAAAGATAATTACAGAGGCT 578372 Query 61711 GTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAAT 61770 |||||||| || |||||| | || || ||| | || | |||| | | || |||||| Sbjct 578373 GTAACTATTGAGAAGGAATACTTTACAGATGCTCTTCCAGCCTCATTACTTGGTATGAAT 578432 Query 61771 TGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGT 61830 || | |||| || ||| |||||| ||||||||| ||||| || || | | | ||| Sbjct 578433 TGCAATTTGATGTGTCAATATGTTGAATATGTTGCCGATCGTCTTTTAGTTGCTCTAGGT 578492 Query 61831 ATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGAT 61890 | ||| ||| || ||| | || |||||||| |||||||| | ||||| | | | Sbjct 578493 AACAAGAAGATTTACAATGTTACTAATCCATTTGACTTCATGGAGAATATTTCATTAGCT 578552 Query 61891 GGCAAGACGAATTTTTTCGAGAA 61913 || ||||| || ||||||||||| Sbjct 578553 GGTAAGACAAACTTTTTCGAGAA 578575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567341031040