Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3 140 3e-28 seq5 109 4e-19 >seq3 Length=1585198 Score = 140 bits (154), Expect = 3e-28 Identities = 360/540 (67%), Gaps = 9/540 (2%) Strand=Plus/Plus Query 61057 TTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCT 61116 ||||| || ||||| ||| | ||| | || || |||| |||||||| ||||| |||||| Sbjct 913070 TTCGTCTTATTCCCAATCAAATATCACGAGATCTGGCAAATGTACAAGAAGGCCGAAGCT 913129 Query 61117 TCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTA 61176 ||||||||||| | || || | ||||| ||||| ||| | | |||||| | | Sbjct 913130 TCCTTCTGGACTGCCGAAGAAATTGATTTATCCAAGGACTTACACGACTGGAACAACAGA 913189 Query 61177 TCGAGCGGT---GAACAACATTTCAT-TAAACATGTGTTGGCGTTCTTTGCCGCTTCGGA 61232 | || | ||| | | ||||| | | | ||||| || ||||| || || || || Sbjct 913190 TTGAATGACAACGAAAGATACTTCATCTCTAGA-GTGTTAGCCTTCTTCGCTGCATCTGA 913248 Query 61233 CGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGC 61292 ||||| |||||||| ||||| | ||| ||| | || |||||| | | || || Sbjct 913249 TGGTATTGTCAATGAAAATTTGGTTGAAAACTTCTCTGCTGAAGTGCAAATCCCAGAAGC 913308 Query 61293 GCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGT 61352 ||||||||||| ||||| || ||||| || | ||||| |||| ||| | Sbjct 913309 CAAATGTTTCTACGGTTTCCAAATCATGATGGAAAACATACACTCTGAGACTTACTCCTT 913368 Query 61353 TCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGA 61412 | ||||| || ||| | | ||| | |||| ||| || ||||| ||||| || Sbjct 913369 ATTGATCGACACTTACGTTAAGGATCCAAAGGAAGCTGATTACTTATTCAACGCCATTGA 913428 Query 61413 GACGATACCGGCGGTGAAGCGGAAAG-CGGATTGGGCCTTCAATTGGATCACCAGT-ACA 61470 || || | | | | |||| | || |||||||| | |||||| || | | Sbjct 913429 ACACATCCCATGTATTA-GAGAAAAGGCTGAATGGGCCTTAAGATGGATCTCCGATGATG 913487 Query 61471 ACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGT 61530 | | || ||| |||||| ||||| | || || || | || |||||| | || ||| | Sbjct 913488 AAGCCTT-ATTCGGTGAAAGATTGGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCT 913546 Query 61531 GGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTC 61590 || || ||||| | ||||| ||||||||||| | || | ||||| ||| | || ||| Sbjct 913547 GGTTCCTTTGCTTCCATCTTCTGGTTGAAGAAGAGAGGTTTAATGCCAGGTTTAACTTTC 913606 >seq5 Length=915096 Score = 109 bits (120), Expect = 4e-19 Identities = 446/697 (64%), Gaps = 12/697 (2%) Strand=Plus/Plus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 |||||||||| || || | ||| || ||||| | || | | ||| || || ||| Sbjct 38783 GGAAGGGCAATGGAAGCCAAGTTACACACAGCGGTTTCTTGTTCATCGGAGTATTCAACA 38842 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTAC---TCTTG 66118 ||||| |||| || | | || | ||||| |||| ||| || ||||| Sbjct 38843 ATTTCACAACACAAGTTGGAGGACTTAATCATACCCAAGTTCTTTTGGTTGGATTTCTTG 38902 Query 66119 CGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATG 66178 || || ||||||||||| | |||| | || || || |||||| ||| | || | | Sbjct 38903 ---TTACAGGCATCCTTGTATAACATGAATGGGGTACCAGTCTCAGTTTGAGCTTCTAAG 38959 Query 66179 ATGGCGTGCCAAAGAGCGCGTGCCTTCACCGT--ACGTACCGCCCTACCTTTGCGTTCGT 66236 |||| || ||| | | ||||| | || | |||| | |||||| | ||||| Sbjct 38960 ATGGAGTACCATAACTTTTGAGCCTTGATAGTGGATCTACC--CTTACCTTCTCTTTCGT 39017 Query 66237 AATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGT 66296 | ||| || | | |||||| ||||| | || || | || |||| ||| Sbjct 39018 ATCTTTCATACAATTCTTCGAATTCATCACCGTAGACATCACCTAAACCTGGAG-CTTCA 39076 Query 66297 G-TGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGT 66355 | ||| | | || | ||| ||||||| ||| || | ||| |||| ||| || Sbjct 39077 GATGGGGAGAACAAAGTCCATTCACCATTAGATTCAACTCTCTTCATGAATAAATCTGGG 39136 Query 66356 ATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGC 66415 ||||| | ||| ||| | ||| | |||| || || | ||||| || || | Sbjct 39137 ATCCATAAGGCTGGGAACAAATCTCTAGCTCTGATTTCTTCCTTACCGTGGTTCTTTCTA 39196 Query 66416 AAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCC 66475 | ||| | || |||||||| || || ||||||||||| | ||| | ||| || | || Sbjct 39197 ATGTCAATAAAATCAAAGATATCAGCGTGCCATGGTTCAATGTACAAGGCAAAAGCACCT 39256 Query 66476 ATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATC 66535 | ||| |||||||| || ||||| | ||| |||||||| || | || ||| Sbjct 39257 GGTCTCTTGTTACCACCTTGATCAACGTATCTGGCGGTGTTGTTGAACACTCTCACCATT 39316 Query 66536 GGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATA 66595 || | || |||||||| | || || || || ||||| || || || | ||| Sbjct 39317 GGAATGATACCGTTAGAGGTACCGTTAGTACCAGCGATGTAAGAACCGGTAGCTCTGATA 39376 Query 66596 TCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACT 66655 | ||| | | | ||||||||||| || ||||| || || |||||| || || Sbjct 39377 TTGTGGATGTGTAACCCAATACCACCAGCGGTCTTAGAAATCAGAGCACATTCCTTCAAA 39436 Query 66656 GTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGG 66692 || | | || || |||||||||||| |||| |||| Sbjct 39437 GTATCGTAAATCCCTTCAATGGAGTCATCCTTCATGG 39473 Score = 96.9 bits (106), Expect = 3e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 67060 CGTCTGCTTGTGCATGTTGGAGATGGCGATACGGGCGGCCAGGACACCATAATCGGGATG 67119 ||| |||||||||| ||| ||||||||||| | || || | || ||||||| ||||| Sbjct 39868 CGTTTGCTTGTGCAAGTTAGAGATGGCGATTCTAGCAGCTAAAACGGCATAATCTGGATG 39927 Query 67120 TAGAGTCATCATACTGGCGGCAGTTTCAGCGGCCAAGGTATCAAGTTCAGCGGTAGTCAC 67179 | ||| ||||| || ||||||||||| |||||| |||| | |||| ||| ||||| Sbjct 39928 AACAGTAGTCATATAAGCAGCAGTTTCAGCAGCCAAGTTATCCAATTCAATGGTGGTCAC 39987 Query 67180 ACC 67182 ||| Sbjct 39988 ACC 39990 Score = 93.3 bits (102), Expect = 3e-14 Identities = 298/455 (65%), Gaps = 8/455 (2%) Strand=Plus/Minus Query 65105 GCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGGCCAGCACGCCAAGCATAGAAA 65164 || ||| | || || | ||||| || || ||||| | ||| | ||| ||||||||| Sbjct 154417 GCAGCCATAGTTCTCAAGTAGTAAATACCAGTCTTCAAGCCCTTAGACCATGCATAGAAA 154358 Query 65165 TGCATCGATGATAATTTTG-CATAATTCGGCTCGGCCACATGCATA--TTCAACGACTGA 65221 ||||| | ||||||| ||| || || || || ||| | | |||| || Sbjct 154357 TGCATACTGGTCAATTTTGACATCGTT-GGTTC--CCTGATGTAGAGATTCATACTTTGT 154301 Query 65222 CTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATGATACGACGTCCCGATATC 65281 ||||| ||| | || | | |||||||||||| ||||||||| | ||| ||| Sbjct 154300 GATTGATCAATGAATGGAGCTCTATCTGCAGCCATCTCAATGATAATCTTTTGCGACATC 154241 Query 65282 TCCCAGACGGTCTTGTACAGGCGACGTACCTCAATTGGAATCTCCTCAATGTCCTGGACT 65341 ||||| || || || ||| | | || | |||||| | | |||| ||||| | Sbjct 154240 TCCCAAACTGTTTTATACTTGTTCTTGATATCCAATGGAATGCCAGCTATGTTCTGGATT 154181 Query 65342 GAACCACGACGTGCA-ATAATGCGATTACGCATCGACTCTGACCACAAACCCAAATCGAT 65400 || ||| | || | | ||| ||| || || ||||||||| ||| | Sbjct 154180 GACCCATCAT-TGAATACAATCAAATTTTTGATTTTTTCATCCCACAAACCAGCATCAAC 154122 Query 65401 AAGATGTTGAACCAAGTGACGATTGATGACTTGGAACTCGCCGGACAGTACACGACGGAC 65460 | || | || ||||| |||| | |||||| || || |||| ||| | | Sbjct 154121 TAAATCATCAATCAAGTATTTGTTGACAATTTGGAATTCACCAGACAATACTCTTCTAGA 154062 Query 65461 ATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGA 65520 ||| || || || ||||| |||||||| |||||||| || ||||| || | |||||| Sbjct 154061 ATACATATTAGAAGTGATCGGTTCAAAACATTCAGTGAATCCAAGAATCTGTGAAGTAGA 154002 Query 65521 TGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC 65555 |||||| ||||| ||| || ||||||||||||| Sbjct 154001 TGCAGTGGGCATCAAAGCTACTAACAATGAGTTTC 153967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567888556720