Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01]
71 sequences; 20,313,720 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq3 645 0.0
seq4 80.6 8e-13
>seq3
Length=2066014
Score = 645 bits (714), Expect = 0.0
Identities = 453/513 (88%), Gaps = 15/513 (3%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|| |||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct 53655 GTTCTCATTACAATTACAAGACCCAAAAGGGCCCTGTATCGTTATTTATTGTCACTACCT 53596
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 53595 CCCCGAATTGGGATTGGGTAATTTDCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 53536
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||| ||||||| ||| |||||||||||||||| | ||||| |||
Sbjct 53535 TCTCAGGCTCCCTCTCCGSAATCGAAMCCTTATTCCCCGTTACCCGTAAAAACCATKGTA 53476
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC- 239
|||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 53475 GGCCTCKATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAACA 53416
Query 240 -TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAA---GGAGCCCCGAAG-GGC 294
| || | | | ||||||| |||||||||||||||| ||| || || ||| |
Sbjct 53415 ATGAA-GTCGTCCGATTCGAAAAGTTATTATGAATCATCAAAAGGGTGC----AAGCACC 53361
Query 295 GTTGGTTTTTTATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATT 352
||| |||||||||||||||||||| ||||||| | | |||| |||||||||||||||
Sbjct 53360 ATTGATTTTTTATCTAATAAATACAACCCTTCCATACGGWCGGGCTTTTTAGCATGTATT 53301
Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGT-AAGGTACTATCAAATAAACGATAACTG 411
|||||||||||||||||||||||||| ||||| || ||||||||||||||| |||||||
Sbjct 53300 AGCTCTAGAATTACCACGGTTATCCAAGTAGTAAACTTACTATCAAATAAACTATAACTG 53241
Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCT 471
|| |||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||
Sbjct 53240 ATWTAATGAGCCATTCGCAGTTTCACTTTATA-ATTGCTTATACTTCGACATGCATGGCT 53182
Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||| ||||||||||||||||||||
Sbjct 53181 TAATCTTTGAGAGAAGCATATGACTACTGGCAG 53149
>seq4
Length=1551466
Score = 80.6 bits (88), Expect = 8e-13
Identities = 82/107 (77%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|| |||||| || |||||| || || || ||||||| |||||||| ||||||||
Sbjct 1511820 GTTCTCATTACACTTACAAAACACATAATGACCCTGTACGCTTATTTATTACCACTACCT 1511879
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGA 107
| ||| | || |||||||||||| ||| ||||||| |||||| ||
Sbjct 1511880 CGCCGAATTCGGTTTGGGTAATTTGGGCGTCTGCTGCATTCCTTCGA 1511926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510398927616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |