Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3 645 0.0 seq4 80.6 8e-13 >seq3 Length=2066014 Score = 645 bits (714), Expect = 0.0 Identities = 453/513 (88%), Gaps = 15/513 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||| ||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 53655 GTTCTCATTACAATTACAAGACCCAAAAGGGCCCTGTATCGTTATTTATTGTCACTACCT 53596 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 53595 CCCCGAATTGGGATTGGGTAATTTDCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 53536 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||| ||||||| ||| |||||||||||||||| | ||||| ||| Sbjct 53535 TCTCAGGCTCCCTCTCCGSAATCGAAMCCTTATTCCCCGTTACCCGTAAAAACCATKGTA 53476 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC- 239 |||| | ||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 53475 GGCCTCKATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAACA 53416 Query 240 -TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAA---GGAGCCCCGAAG-GGC 294 | || | | | ||||||| |||||||||||||||| ||| || || ||| | Sbjct 53415 ATGAA-GTCGTCCGATTCGAAAAGTTATTATGAATCATCAAAAGGGTGC----AAGCACC 53361 Query 295 GTTGGTTTTTTATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATT 352 ||| |||||||||||||||||||| ||||||| | | |||| ||||||||||||||| Sbjct 53360 ATTGATTTTTTATCTAATAAATACAACCCTTCCATACGGWCGGGCTTTTTAGCATGTATT 53301 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGT-AAGGTACTATCAAATAAACGATAACTG 411 |||||||||||||||||||||||||| ||||| || ||||||||||||||| ||||||| Sbjct 53300 AGCTCTAGAATTACCACGGTTATCCAAGTAGTAAACTTACTATCAAATAAACTATAACTG 53241 Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCT 471 || |||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||| Sbjct 53240 ATWTAATGAGCCATTCGCAGTTTCACTTTATA-ATTGCTTATACTTCGACATGCATGGCT 53182 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||| |||||||||||||||||||| Sbjct 53181 TAATCTTTGAGAGAAGCATATGACTACTGGCAG 53149 >seq4 Length=1551466 Score = 80.6 bits (88), Expect = 8e-13 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||| || |||||| || || || ||||||| |||||||| |||||||| Sbjct 1511820 GTTCTCATTACACTTACAAAACACATAATGACCCTGTACGCTTATTTATTACCACTACCT 1511879 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGA 107 | ||| | || |||||||||||| ||| ||||||| |||||| || Sbjct 1511880 CGCCGAATTCGGTTTGGGTAATTTGGGCGTCTGCTGCATTCCTTCGA 1511926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510398927616